Analysis of interatomic Contacts of Structural Units in PDB entry:
6M7L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M7L entry

There are 2 chains in PDB entry 6M7L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 PRO 1040PRO 1490
A
 HIS 6TRP 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 6M7L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
1044 1054Right-handed alpha
Helix 2
AA2
B
1076 1091Right-handed alpha
Helix 3
AA3
B
1092 1094Right-handed 310
Helix 4
AA4
B
1125 1127Right-handed 310
Helix 5
AA5
B
1128 1139Right-handed alpha
Helix 6
AA6
B
1173 1192Right-handed alpha
Helix 7
AA7
B
1205 1216Right-handed alpha
Helix 8
AA8
B
1217 1221Right-handed 310
Helix 9
AA9
B
1225 1238Right-handed alpha
Helix 10
AB1
B
1273 1287Right-handed alpha
Helix 11
AB2
B
1290 1308Right-handed alpha
Helix 12
AB3
B
1324 1328Right-handed 310
Helix 13
AB4
B
1349 1366Right-handed alpha
Helix 14
AB5
B
1371 1380Right-handed alpha
Helix 15
AB6
B
1403 1408Right-handed 310
Helix 16
AB7
B
1458 1479Right-handed alpha
Helix 17
AB8
A
6 11Right-handed 310
Helix 18
AB9
A
18 27Right-handed alpha
Helix 19
AC1
A
47 57Right-handed alpha
Helix 20
AC2
A
79 83Right-handed 310
Helix 21
AC3
A
86 96Right-handed alpha
Helix 22
AC4
A
97 99Right-handed 310
Helix 23
AC5
A
100 126Right-handed alpha
Helix 24
AC6
A
131 135Right-handed alpha
Helix 25
AC7
A
135 149Right-handed alpha
Helix 26
AC8
A
154 163Right-handed alpha
Helix 27
AC9
A
167 192Right-handed alpha
Helix 28
AD1
A
195 205Right-handed alpha
Helix 29
AD2
A
210 223Right-handed alpha
Helix 30
AD3
A
223 242Right-handed alpha
Helix 31
AD4
A
243 253Right-handed alpha
Helix 32
AD5
A
256 269Right-handed alpha
Helix 33
AD6
A
299 306Right-handed alpha
Helix 34
AD7
A
327 331Right-handed 310
Helix 35
AD8
A
334 353Right-handed alpha
Helix 36
AD9
A
361 365Right-handed 310
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There are 7 sheets in PDB entry 6M7L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1119 1121first strand
Strand 2
B
1149 1155parallel
Strand 3
B
1160 1168anti-parallel
Strand 4
B
1064 1072anti-parallel
Strand 5
B
1414 1418anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1096 1097first strand
Strand 2
B
1108 1109anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1265 1272first strand
Strand 2
B
1443 1453anti-parallel
Strand 3
B
1429 1437anti-parallel
Strand 4
B
1393 1399parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1311 1318first strand
Strand 2
B
1336 1343anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
41 45anti-parallel
Strand 3
A
296 298parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
278 279anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 130first strand
Strand 2
A
381 383anti-parallel
Strand 3
A
357 358anti-parallel
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