Analysis of interatomic Contacts of Structural Units in PDB entry:
6M7Z

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6M7Z entry

There are 5 chains in PDB entry 6M7Z (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 68	TYR 372
B	ILE 65	ARG 371
C	PRO 66	TYR 372
D	THR 71	TYR 372
E	ARG 64	ASP 328

There are 99 helices in PDB entry 6M7Z. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	71	82	Right-handed alpha
Helix 2	AA2	A	86	89	Right-handed 310
Helix 3	AA3	A	90	98	Right-handed alpha
Helix 4	AA4	A	116	124	Right-handed alpha
Helix 5	AA5	A	126	133	Right-handed alpha
Helix 6	AA6	A	145	159	Right-handed alpha
Helix 7	AA7	A	191	197	Right-handed alpha
Helix 8	AA8	A	203	220	Right-handed alpha
Helix 9	AA9	A	229	231	Right-handed 310
Helix 10	AB1	A	245	249	Right-handed 310
Helix 11	AB2	A	287	307	Right-handed alpha
Helix 12	AB3	A	320	335	Right-handed alpha
Helix 13	AB4	A	338	342	Right-handed 310
Helix 14	AB5	A	344	350	Right-handed alpha
Helix 15	AB6	A	351	355	Right-handed 310
Helix 16	AB7	A	358	365	Right-handed alpha
Helix 17	AB8	B	66	70	Right-handed 310
Helix 18	AB9	B	71	82	Right-handed alpha
Helix 19	AC1	B	86	90	Right-handed 310
Helix 20	AC2	B	91	98	Right-handed alpha
Helix 21	AC3	B	116	124	Right-handed alpha
Helix 22	AC4	B	126	133	Right-handed alpha
Helix 23	AC5	B	145	159	Right-handed alpha
Helix 24	AC6	B	191	197	Right-handed alpha
Helix 25	AC7	B	203	220	Right-handed alpha
Helix 26	AC8	B	229	231	Right-handed 310
Helix 27	AC9	B	245	249	Right-handed 310
Helix 28	AD1	B	287	307	Right-handed alpha
Helix 29	AD2	B	321	335	Right-handed alpha
Helix 30	AD3	B	338	342	Right-handed 310
Helix 31	AD4	B	344	350	Right-handed alpha
Helix 32	AD5	B	351	355	Right-handed 310
Helix 33	AD6	B	358	365	Right-handed alpha
Helix 34	AD7	C	66	70	Right-handed 310
Helix 35	AD8	C	71	82	Right-handed alpha
Helix 36	AD9	C	86	90	Right-handed 310
Helix 37	AE1	C	91	98	Right-handed alpha
Helix 38	AE2	C	116	124	Right-handed alpha
Helix 39	AE3	C	126	133	Right-handed alpha
Helix 40	AE4	C	145	159	Right-handed alpha
Helix 41	AE5	C	191	197	Right-handed alpha
Helix 42	AE6	C	203	220	Right-handed alpha
Helix 43	AE7	C	229	231	Right-handed 310
Helix 44	AE8	C	245	249	Right-handed 310
Helix 45	AE9	C	288	307	Right-handed alpha
Helix 46	AF1	C	320	335	Right-handed alpha
Helix 47	AF2	C	338	342	Right-handed 310
Helix 48	AF3	C	344	350	Right-handed alpha
Helix 49	AF4	C	351	355	Right-handed 310
Helix 50	AF5	C	358	365	Right-handed alpha
Helix 51	AF6	D	72	82	Right-handed alpha
Helix 52	AF7	D	86	90	Right-handed 310
Helix 53	AF8	D	91	98	Right-handed alpha
Helix 54	AF9	D	116	124	Right-handed alpha
Helix 55	AG1	D	126	133	Right-handed alpha
Helix 56	AG2	D	146	159	Right-handed alpha
Helix 57	AG3	D	191	197	Right-handed alpha
Helix 58	AG4	D	203	220	Right-handed alpha
Helix 59	AG5	D	229	231	Right-handed 310
Helix 60	AG6	D	245	249	Right-handed 310
Helix 61	AG7	D	287	307	Right-handed alpha
Helix 62	AG8	D	320	335	Right-handed alpha
Helix 63	AG9	D	338	342	Right-handed 310
Helix 64	AH1	D	344	350	Right-handed alpha
Helix 65	AH2	D	351	355	Right-handed 310
Helix 66	AH3	D	358	365	Right-handed alpha
Helix 67	AH4	E	66	70	Right-handed 310
Helix 68	AH5	E	71	82	Right-handed alpha
Helix 69	AH6	E	88	98	Right-handed alpha
Helix 70	AH7	E	116	124	Right-handed alpha
Helix 71	AH8	E	126	133	Right-handed alpha
Helix 72	AH9	E	145	159	Right-handed alpha
Helix 73	AI1	E	191	197	Right-handed alpha
Helix 74	AI2	E	203	220	Right-handed alpha
Helix 75	AI3	E	229	231	Right-handed 310
Helix 76	AI4	E	245	249	Right-handed 310
Helix 77	AI5	E	287	307	Right-handed alpha
Helix 78	AI6	E	320	335	Right-handed alpha
Helix 79	AI7	E	338	342	Right-handed 310
Helix 80	AI8	E	344	350	Right-handed alpha
Helix 81	AI9	E	351	355	Right-handed 310
Helix 82	AJ1	E	358	365	Right-handed alpha
Helix 83	AJ2	F	66	70	Right-handed 310
Helix 84	AJ3	F	71	82	Right-handed alpha
Helix 85	AJ4	F	86	90	Right-handed 310
Helix 86	AJ5	F	91	98	Right-handed alpha
Helix 87	AJ6	F	116	124	Right-handed alpha
Helix 88	AJ7	F	126	133	Right-handed alpha
Helix 89	AJ8	F	145	159	Right-handed alpha
Helix 90	AJ9	F	191	197	Right-handed alpha
Helix 91	AK1	F	203	220	Right-handed alpha
Helix 92	AK2	F	229	231	Right-handed 310
Helix 93	AK3	F	245	249	Right-handed 310
Helix 94	AK4	F	287	307	Right-handed alpha
Helix 95	AK5	F	321	335	Right-handed alpha
Helix 96	AK6	F	338	342	Right-handed 310
Helix 97	AK7	F	344	350	Right-handed alpha
Helix 98	AK8	F	351	355	Right-handed 310
Helix 99	AK9	F	358	365	Right-handed alpha

There are 18 sheets in PDB entry 6M7Z. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	112	first strand
Strand 2	A	134	140	anti-parallel
Strand 3	A	179	185	anti-parallel
Strand 4	A	172	175	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	189	190	first strand
Strand 2	A	233	235	anti-parallel
Strand 3	A	241	243	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	223	224	first strand
Strand 2	A	250	251	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	108	112	first strand
Strand 2	B	134	140	anti-parallel
Strand 3	B	179	185	anti-parallel
Strand 4	B	172	175	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	189	190	first strand
Strand 2	B	233	235	anti-parallel
Strand 3	B	241	243	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	223	224	first strand
Strand 2	B	250	251	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	108	112	first strand
Strand 2	C	134	140	anti-parallel
Strand 3	C	179	185	anti-parallel
Strand 4	C	172	175	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	189	190	first strand
Strand 2	C	233	235	anti-parallel
Strand 3	C	241	243	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	223	224	first strand
Strand 2	C	250	251	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	108	112	first strand
Strand 2	D	134	140	anti-parallel
Strand 3	D	179	185	anti-parallel
Strand 4	D	172	175	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	189	190	first strand
Strand 2	D	233	235	anti-parallel
Strand 3	D	241	243	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	223	224	first strand
Strand 2	D	250	251	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	108	112	first strand
Strand 2	E	134	140	anti-parallel
Strand 3	E	179	185	anti-parallel
Strand 4	E	172	175	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	189	190	first strand
Strand 2	E	233	235	anti-parallel
Strand 3	E	241	243	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	223	224	first strand
Strand 2	E	250	251	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	108	112	first strand
Strand 2	F	134	140	anti-parallel
Strand 3	F	179	185	anti-parallel
Strand 4	F	172	175	anti-parallel

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There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	189	190	first strand
Strand 2	F	233	235	anti-parallel
Strand 3	F	241	243	anti-parallel

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There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	223	224	first strand
Strand 2	F	250	251	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6M7Z

Analysis of interatomic Contacts of Structural Units in PDB entry:
6M7Z