Analysis of interatomic Contacts of Structural Units in PDB entry:
6M9G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6M9G entry

There are 2 chains in PDB entry 6M9G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4ASN 283
B
 VAL 9SER 274
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 6M9G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 23Right-handed alpha
Helix 2
AA2
A
23 33Right-handed alpha
Helix 3
AA3
A
34 48Right-handed alpha
Helix 4
AA4
A
53 79Right-handed alpha
Helix 5
AA5
A
80 84Right-handed 310
Helix 6
AA6
A
88 99Right-handed alpha
Helix 7
AA7
A
102 107Right-handed alpha
Helix 8
AA8
A
128 135Right-handed alpha
Helix 9
AA9
A
183 201Right-handed alpha
Helix 10
AB1
A
250 267Right-handed alpha
Helix 11
AB2
A
271 273Right-handed 310
Helix 12
AB3
A
274 279Right-handed alpha
Helix 13
AB4
B
10 23Right-handed alpha
Helix 14
AB5
B
23 33Right-handed alpha
Helix 15
AB6
B
34 48Right-handed alpha
Helix 16
AB7
B
53 79Right-handed alpha
Helix 17
AB8
B
88 99Right-handed alpha
Helix 18
AB9
B
101 107Right-handed alpha
Helix 19
AC1
B
128 135Right-handed alpha
Helix 20
AC2
B
183 201Right-handed alpha
Helix 21
AC3
B
237 239Right-handed 310
Helix 22
AC4
B
250 266Right-handed alpha
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There are 2 sheets in PDB entry 6M9G. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 124first strand
Strand 2
A
138 157anti-parallel
Strand 3
A
165 182anti-parallel
Strand 4
A
205 213parallel
Strand 5
A
227 235parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
227 235first strand
Strand 2
B
205 213parallel
Strand 3
B
164 182parallel
Strand 4
B
138 158anti-parallel
Strand 5
B
112 124anti-parallel
Strand 6
B
164 182parallel
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