Analysis of interatomic Contacts of Structural Units in PDB entry:
6MBG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MBG entry

There is 1 chain in PDB entry 6MBG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1700ALA 1979
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 6MBG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1729 1734Right-handed 310
Helix 2
AA2
A
1745 1760Right-handed alpha
Helix 3
AA3
A
1804 1808Right-handed 310
Helix 4
AA4
A
1810 1814Right-handed 310
Helix 5
AA5
A
1844 1853Right-handed alpha
Helix 6
AA6
A
1857 1861Right-handed 310
Helix 7
AA7
A
1880 1886Right-handed alpha
Helix 8
AA8
A
1887 1890Right-handed 310
Helix 9
AA9
A
1893 1909Right-handed alpha
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There are 2 sheets in PDB entry 6MBG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1708 1710first strand
Strand 2
A
1718 1724anti-parallel
Strand 3
A
1787 1794anti-parallel
Strand 4
A
1797 1803anti-parallel
Strand 5
A
1815 1825anti-parallel
Strand 6
A
1767 1775anti-parallel
Strand 7
A
1918 1928anti-parallel
Strand 8
A
1967 1978anti-parallel
Strand 9
A
1953 1961anti-parallel
Strand 10
A
1935 1942anti-parallel
Strand 11
A
1872 1878anti-parallel
Strand 12
A
1863 1869anti-parallel
Strand 13
A
1841 1842anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1736 1737first strand
Strand 2
A
1740 1742anti-parallel
Strand 3
A
1780 1781anti-parallel
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