Analysis of interatomic Contacts of Structural Units in PDB entry:
6MC6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MC6 entry

There are 2 chains in PDB entry 6MC6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 12LEU 281
B
 ASP 11GLY 280
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6MC6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 23Right-handed alpha
Helix 2
AA2
A
29 36Right-handed alpha
Helix 3
AA3
A
39 59Right-handed alpha
Helix 4
AA4
A
92 101Right-handed alpha
Helix 5
AA5
A
102 104Right-handed 310
Helix 6
AA6
A
128 139Right-handed alpha
Helix 7
AA7
A
173 187Right-handed alpha
Helix 8
AA8
A
191 206Right-handed alpha
Helix 9
AA9
A
206 214Right-handed alpha
Helix 10
AB1
A
218 225Right-handed alpha
Helix 11
AB2
A
226 230Right-handed 310
Helix 12
AB3
A
243 246Right-handed 310
Helix 13
AB4
A
247 279Right-handed alpha
Helix 14
AB5
B
13 23Right-handed alpha
Helix 15
AB6
B
29 36Right-handed alpha
Helix 16
AB7
B
39 59Right-handed alpha
Helix 17
AB8
B
92 101Right-handed alpha
Helix 18
AB9
B
102 104Right-handed 310
Helix 19
AC1
B
128 139Right-handed alpha
Helix 20
AC2
B
173 189Right-handed alpha
Helix 21
AC3
B
191 212Right-handed alpha
Helix 22
AC4
B
215 223Right-handed alpha
Helix 23
AC5
B
226 230Right-handed 310
Helix 24
AC6
B
243 246Right-handed 310
Helix 25
AC7
B
247 279Right-handed alpha
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There are 6 sheets in PDB entry 6MC6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 71first strand
Strand 2
A
77 81anti-parallel
Strand 3
A
84 88anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
154 160anti-parallel
Strand 3
A
147 148anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
154 160anti-parallel
Strand 3
A
163 169anti-parallel
Strand 4
A
235 241anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 71first strand
Strand 2
B
77 81anti-parallel
Strand 3
B
84 88anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
154 160anti-parallel
Strand 3
B
147 148anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
154 160anti-parallel
Strand 3
B
163 169anti-parallel
Strand 4
B
235 241anti-parallel
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