Analysis of interatomic Contacts of Structural Units in PDB entry:
6MCA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MCA entry

There is 1 chain in PDB entry 6MCA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 0ALA 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6MCA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 9Right-handed alpha
Helix 2
AA2
A
14 21Right-handed alpha
Helix 3
AA3
A
34 43Right-handed alpha
Helix 4
AA4
A
44 54Right-handed alpha
Helix 5
AA5
A
67 75Right-handed alpha
Helix 6
AA6
A
77 87Right-handed alpha
Helix 7
AA7
A
102 109Right-handed alpha
Helix 8
AA8
A
110 120Right-handed alpha
Helix 9
AA9
A
123 140Right-handed alpha
Helix 10
AB1
A
164 180Right-handed alpha
Helix 11
AB2
A
182 190Right-handed 310
Helix 12
AB3
A
191 211Right-handed alpha
Helix 13
AB4
A
212 214Right-handed 310
Helix 14
AB5
A
218 229Right-handed alpha
Helix 15
AB6
A
262 267Right-handed alpha
Helix 16
AB7
A
276 280Right-handed 310
Helix 17
AB8
A
281 290Right-handed alpha
Helix 18
AB9
A
294 300Right-handed alpha
Helix 19
AC1
A
300 307Right-handed alpha
Helix 20
AC2
A
324 331Right-handed alpha
Helix 21
AC3
A
331 342Right-handed alpha
Helix 22
AC4
A
349 377Right-handed alpha
Helix 23
AC5
A
380 399Right-handed alpha
Helix 24
AC6
A
403 418Right-handed alpha
Helix 25
AC7
A
423 434Right-handed alpha
Helix 26
AC8
A
439 452Right-handed alpha
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There are 2 sheets in PDB entry 6MCA. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
145 149first strand
Strand 2
A
155 159anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 240first strand
Strand 2
A
243 250anti-parallel
Strand 3
A
253 257anti-parallel
Strand 4
A
269 274anti-parallel
Strand 5
A
308 314anti-parallel
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