Analysis of interatomic Contacts of Structural Units in PDB entry:
6MCQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MCQ entry

There are 4 chains in PDB entry 6MCQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 10PHE 528
B
 ASN 31SER 213
C
 LYS 11ASN 529
D
 ALA 32ASN 66
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 6MCQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 23Right-handed alpha
Helix 2
AA2
A
27 43Right-handed alpha
Helix 3
AA3
A
48 56Right-handed alpha
Helix 4
AA4
A
62 69Right-handed alpha
Helix 5
AA5
A
77 92Right-handed alpha
Helix 6
AA6
A
100 104Right-handed 310
Helix 7
AA7
A
105 120Right-handed alpha
Helix 8
AA8
A
121 124Right-handed 310
Helix 9
AA9
A
125 143Right-handed alpha
Helix 10
AB1
A
143 160Right-handed alpha
Helix 11
AB2
A
160 169Right-handed alpha
Helix 12
AB3
A
216 223Right-handed alpha
Helix 13
AB4
A
224 231Right-handed 310
Helix 14
AB5
A
264 273Right-handed alpha
Helix 15
AB6
A
274 275Right-handed 310
Helix 16
AB7
A
276 278Right-handed 310
Helix 17
AB8
A
279 301Right-handed alpha
Helix 18
AB9
A
309 313Right-handed 310
Helix 19
AC1
A
335 339Right-handed 310
Helix 20
AC2
A
342 346Right-handed 310
Helix 21
AC3
A
347 352Right-handed alpha
Helix 22
AC4
A
367 371Right-handed 310
Helix 23
AC5
A
375 395Right-handed alpha
Helix 24
AC6
A
411 415Right-handed 310
Helix 25
AC7
A
419 433Right-handed alpha
Helix 26
AC8
A
436 440Right-handed 310
Helix 27
AC9
A
442 451Right-handed alpha
Helix 28
AD1
A
456 468Right-handed alpha
Helix 29
AD2
A
469 474Right-handed 310
Helix 30
AD3
A
475 488Right-handed alpha
Helix 31
AD4
A
492 499Right-handed alpha
Helix 32
AD5
A
499 506Right-handed alpha
Helix 33
AD6
A
513 528Right-handed alpha
Helix 34
AD7
B
40 45Right-handed alpha
Helix 35
AD8
B
52 76Right-handed alpha
Helix 36
AD9
B
110 127Right-handed alpha
Helix 37
AE1
B
143 173Right-handed alpha
Helix 38
AE2
B
175 194Right-handed alpha
Helix 39
AE3
B
201 203Right-handed 310
Helix 40
AE4
B
204 212Right-handed alpha
Helix 41
AE5
C
13 23Right-handed alpha
Helix 42
AE6
C
27 43Right-handed alpha
Helix 43
AE7
C
48 53Right-handed alpha
Helix 44
AE8
C
62 69Right-handed alpha
Helix 45
AE9
C
77 91Right-handed alpha
Helix 46
AF1
C
100 104Right-handed 310
Helix 47
AF2
C
105 120Right-handed alpha
Helix 48
AF3
C
121 124Right-handed 310
Helix 49
AF4
C
125 143Right-handed alpha
Helix 50
AF5
C
143 160Right-handed alpha
Helix 51
AF6
C
160 169Right-handed alpha
Helix 52
AF7
C
171 175Right-handed 310
Helix 53
AF8
C
180 184Right-handed 310
Helix 54
AF9
C
212 223Right-handed alpha
Helix 55
AG1
C
225 231Right-handed 310
Helix 56
AG2
C
264 272Right-handed alpha
Helix 57
AG3
C
273 275Right-handed 310
Helix 58
AG4
C
276 278Right-handed 310
Helix 59
AG5
C
279 301Right-handed alpha
Helix 60
AG6
C
309 313Right-handed 310
Helix 61
AG7
C
335 339Right-handed 310
Helix 62
AG8
C
347 352Right-handed alpha
Helix 63
AG9
C
367 371Right-handed 310
Helix 64
AH1
C
375 395Right-handed alpha
Helix 65
AH2
C
411 415Right-handed 310
Helix 66
AH3
C
419 433Right-handed alpha
Helix 67
AH4
C
436 440Right-handed 310
Helix 68
AH5
C
442 450Right-handed alpha
Helix 69
AH6
C
451 453Right-handed 310
Helix 70
AH7
C
456 468Right-handed alpha
Helix 71
AH8
C
470 474Right-handed 310
Helix 72
AH9
C
475 487Right-handed alpha
Helix 73
AI1
C
492 498Right-handed alpha
Helix 74
AI2
C
499 506Right-handed alpha
Helix 75
AI3
C
513 528Right-handed alpha
Helix 76
AI4
D
40 45Right-handed alpha
Helix 77
AI5
D
52 76Right-handed alpha
Helix 78
AI6
D
110 127Right-handed alpha
Helix 79
AI7
D
143 166Right-handed alpha
Helix 80
AI8
D
166 173Right-handed alpha
Helix 81
AI9
D
175 194Right-handed alpha
Helix 82
AJ1
D
201 203Right-handed 310
Helix 83
AJ2
D
204 211Right-handed alpha
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There are 6 sheets in PDB entry 6MCQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
188 189first strand
Strand 2
C
194 197anti-parallel
Strand 3
C
206 210anti-parallel
Strand 4
C
249 258anti-parallel
Strand 5
C
234 243anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 210first strand
Strand 2
A
249 258anti-parallel
Strand 3
A
234 243anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 316first strand
Strand 2
A
319 321anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
354 356first strand
Strand 2
A
362 365anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
314 316first strand
Strand 2
C
319 321anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
354 356first strand
Strand 2
C
362 365anti-parallel
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