Analysis of interatomic Contacts of Structural Units in PDB entry:
6MCU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MCU entry

There are 12 chains in PDB entry 6MCU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 1	LYS 133
B	THR 1	LYS 133
C	THR 1	LYS 133
D	THR 1	LYS 133
E	THR 1	LYS 133
F	THR 1	LYS 133
G	THR 1	LYS 133
H	THR 1	LYS 133
I	THR 1	LYS 133
J	THR 1	LYS 133
K	THR 1	LYS 133
L	THR 1	LYS 133

There are 24 helices in PDB entry 6MCU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	15	23	Right-handed alpha
Helix 2	AA2	A	26	34	Right-handed alpha
Helix 3	AA3	B	15	23	Right-handed alpha
Helix 4	AA4	B	26	34	Right-handed alpha
Helix 5	AA5	C	15	23	Right-handed alpha
Helix 6	AA6	C	26	34	Right-handed alpha
Helix 7	AA7	D	15	23	Right-handed alpha
Helix 8	AA8	D	26	34	Right-handed alpha
Helix 9	AA9	E	15	23	Right-handed alpha
Helix 10	AB1	E	26	34	Right-handed alpha
Helix 11	AB2	F	15	23	Right-handed alpha
Helix 12	AB3	F	26	34	Right-handed alpha
Helix 13	AB4	G	15	23	Right-handed alpha
Helix 14	AB5	G	26	34	Right-handed alpha
Helix 15	AB6	H	15	23	Right-handed alpha
Helix 16	AB7	H	26	34	Right-handed alpha
Helix 17	AB8	I	15	23	Right-handed alpha
Helix 18	AB9	I	26	34	Right-handed alpha
Helix 19	AC1	J	15	23	Right-handed alpha
Helix 20	AC2	J	26	34	Right-handed alpha
Helix 21	AC3	K	15	23	Right-handed alpha
Helix 22	AC4	K	26	35	Right-handed alpha
Helix 23	AC5	L	15	23	Right-handed alpha
Helix 24	AC6	L	26	34	Right-handed alpha

There are 11 sheets in PDB entry 6MCU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	58	65	first strand
Strand 2	A	48	55	anti-parallel
Strand 3	A	38	45	anti-parallel
Strand 4	A	6	14	anti-parallel
Strand 5	D	124	132	anti-parallel
Strand 6	D	114	121	anti-parallel
Strand 7	D	105	111	anti-parallel
Strand 8	D	93	99	anti-parallel
Strand 9	D	81	88	anti-parallel
Strand 10	D	70	73	anti-parallel

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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	59	65	first strand
Strand 2	D	48	56	anti-parallel
Strand 3	D	37	45	anti-parallel
Strand 4	D	6	14	anti-parallel
Strand 5	A	124	132	anti-parallel
Strand 6	A	114	121	anti-parallel
Strand 7	A	105	111	anti-parallel
Strand 8	A	92	98	anti-parallel
Strand 9	A	81	89	anti-parallel
Strand 10	A	70	73	anti-parallel

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There are 18 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	73	first strand
Strand 2	B	81	89	anti-parallel
Strand 3	B	92	98	anti-parallel
Strand 4	B	104	111	anti-parallel
Strand 5	B	114	121	anti-parallel
Strand 6	B	124	132	anti-parallel
Strand 7	C	6	14	anti-parallel
Strand 8	C	37	45	anti-parallel
Strand 9	C	48	65	anti-parallel
Strand 10	B	48	65	anti-parallel
Strand 11	B	38	45	anti-parallel
Strand 12	B	6	14	anti-parallel
Strand 13	C	124	132	anti-parallel
Strand 14	C	114	121	anti-parallel
Strand 15	C	105	111	anti-parallel
Strand 16	C	92	98	anti-parallel
Strand 17	C	81	89	anti-parallel
Strand 18	C	70	73	anti-parallel

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There are 10 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	59	65	first strand
Strand 2	E	48	56	anti-parallel
Strand 3	E	37	45	anti-parallel
Strand 4	E	6	14	anti-parallel
Strand 5	H	124	132	anti-parallel
Strand 6	H	114	121	anti-parallel
Strand 7	H	105	111	anti-parallel
Strand 8	H	92	98	anti-parallel
Strand 9	H	81	89	anti-parallel
Strand 10	H	70	73	anti-parallel

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There are 10 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	59	65	first strand
Strand 2	H	48	54	anti-parallel
Strand 3	H	39	45	anti-parallel
Strand 4	H	6	14	anti-parallel
Strand 5	E	124	132	anti-parallel
Strand 6	E	114	121	anti-parallel
Strand 7	E	104	111	anti-parallel
Strand 8	E	92	98	anti-parallel
Strand 9	E	81	89	anti-parallel
Strand 10	E	70	73	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	60	65	first strand
Strand 2	F	48	53	anti-parallel
Strand 3	F	39	45	anti-parallel
Strand 4	F	6	14	anti-parallel
Strand 5	G	124	132	anti-parallel
Strand 6	G	114	121	anti-parallel
Strand 7	G	105	111	anti-parallel
Strand 8	G	92	98	anti-parallel
Strand 9	G	81	89	anti-parallel
Strand 10	G	70	73	anti-parallel

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There are 10 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	60	65	first strand
Strand 2	G	48	53	anti-parallel
Strand 3	G	39	45	anti-parallel
Strand 4	G	6	14	anti-parallel
Strand 5	F	124	132	anti-parallel
Strand 6	F	114	121	anti-parallel
Strand 7	F	105	111	anti-parallel
Strand 8	F	92	98	anti-parallel
Strand 9	F	81	89	anti-parallel
Strand 10	F	70	73	anti-parallel

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There are 10 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	59	65	first strand
Strand 2	I	48	56	anti-parallel
Strand 3	I	37	45	anti-parallel
Strand 4	I	6	14	anti-parallel
Strand 5	L	124	132	anti-parallel
Strand 6	L	114	121	anti-parallel
Strand 7	L	105	111	anti-parallel
Strand 8	L	92	98	anti-parallel
Strand 9	L	81	89	anti-parallel
Strand 10	L	70	73	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	L	48	56	anti-parallel
Strand 3	I	63	65	anti-parallel

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There are 10 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	59	60	first strand
Strand 2	L	48	56	anti-parallel
Strand 3	L	37	45	anti-parallel
Strand 4	L	6	14	anti-parallel
Strand 5	I	124	132	anti-parallel
Strand 6	I	114	121	anti-parallel
Strand 7	I	105	111	anti-parallel
Strand 8	I	92	98	anti-parallel
Strand 9	I	81	89	anti-parallel
Strand 10	I	69	73	anti-parallel

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There are 18 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	70	73	first strand
Strand 2	J	81	89	anti-parallel
Strand 3	J	92	98	anti-parallel
Strand 4	J	105	111	anti-parallel
Strand 5	J	114	121	anti-parallel
Strand 6	J	124	132	anti-parallel
Strand 7	K	6	14	anti-parallel
Strand 8	K	37	45	anti-parallel
Strand 9	K	48	65	anti-parallel
Strand 10	J	48	65	anti-parallel
Strand 11	J	37	45	anti-parallel
Strand 12	J	6	14	anti-parallel
Strand 13	K	124	132	anti-parallel
Strand 14	K	114	121	anti-parallel
Strand 15	K	105	111	anti-parallel
Strand 16	K	92	98	anti-parallel
Strand 17	K	81	89	anti-parallel
Strand 18	K	70	73	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MCU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MCU