Analysis of interatomic Contacts of Structural Units in PDB entry:
6ME6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6ME6 entry

There are 2 chains in PDB entry 6ME6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2001ASN 328
B
 ALA 2001ASN 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 6ME6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2002 2019Right-handed alpha
Helix 2
AA2
A
2022 2042Right-handed alpha
Helix 3
AA3
A
2057 2081Right-handed alpha
Helix 4
AA4
A
2083 2090Right-handed alpha
Helix 5
AA5
A
2092 2101Right-handed alpha
Helix 6
AA6
A
38 68Right-handed alpha
Helix 7
AA7
A
68 73Right-handed alpha
Helix 8
AA8
A
76 92Right-handed alpha
Helix 9
AA9
A
92 103Right-handed alpha
Helix 10
AB1
A
110 144Right-handed alpha
Helix 11
AB2
A
144 151Right-handed alpha
Helix 12
AB3
A
155 173Right-handed alpha
Helix 13
AB4
A
174 179Right-handed alpha
Helix 14
AB5
A
185 188Right-handed 310
Helix 15
AB6
A
197 208Right-handed alpha
Helix 16
AB7
A
209 230Right-handed alpha
Helix 17
AB8
A
1018 1022Right-handed 310
Helix 18
AB9
A
1028 1032Right-handed 310
Helix 19
AC1
A
1044 1046Right-handed 310
Helix 20
AC2
A
245 277Right-handed alpha
Helix 21
AC3
A
286 300Right-handed alpha
Helix 22
AC4
A
303 312Right-handed alpha
Helix 23
AC5
A
312 328Right-handed alpha
Helix 24
AC6
B
2002 2019Right-handed alpha
Helix 25
AC7
B
2022 2042Right-handed alpha
Helix 26
AC8
B
2057 2081Right-handed alpha
Helix 27
AC9
B
2083 2096Right-handed alpha
Helix 28
AD1
B
2096 2103Right-handed alpha
Helix 29
AD2
B
38 67Right-handed alpha
Helix 30
AD3
B
69 74Right-handed 310
Helix 31
AD4
B
75 92Right-handed alpha
Helix 32
AD5
B
92 103Right-handed alpha
Helix 33
AD6
B
109 144Right-handed alpha
Helix 34
AD7
B
144 151Right-handed alpha
Helix 35
AD8
B
155 173Right-handed alpha
Helix 36
AD9
B
174 179Right-handed alpha
Helix 37
AE1
B
185 188Right-handed 310
Helix 38
AE2
B
197 208Right-handed alpha
Helix 39
AE3
B
209 231Right-handed alpha
Helix 40
AE4
B
246 249Right-handed 310
Helix 41
AE5
B
250 277Right-handed alpha
Helix 42
AE6
B
286 300Right-handed alpha
Helix 43
AE7
B
303 312Right-handed alpha
Helix 44
AE8
B
312 328Right-handed alpha
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There are 3 sheets in PDB entry 6ME6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 184first strand
Strand 2
A
189 192anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1011 1012first strand
Strand 2
A
1003 1005anti-parallel
Strand 3
A
1048 1050anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 184first strand
Strand 2
B
189 192anti-parallel
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