Analysis of interatomic Contacts of Structural Units in PDB entry:
6MF0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MF0 entry

There are 2 chains in PDB entry 6MF0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 1	GLN 2329
B	ALA 1	GLN 2329

There are 39 helices in PDB entry 6MF0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	24	Right-handed 310
Helix 2	AA2	A	121	125	Right-handed 310
Helix 3	AA3	A	142	146	Right-handed 310
Helix 4	AA4	A	164	170	Right-handed alpha
Helix 5	AA5	A	206	208	Right-handed 310
Helix 6	AA6	A	407	412	Right-handed alpha
Helix 7	AA7	A	516	520	Right-handed 310
Helix 8	AA8	A	538	546	Right-handed alpha
Helix 9	AA9	A	586	595	Right-handed alpha
Helix 10	AB1	A	605	610	Right-handed alpha
Helix 11	AB2	A	1753	1757	Right-handed 310
Helix 12	AB3	A	1820	1824	Right-handed 310
Helix 13	AB4	A	1844	1850	Right-handed alpha
Helix 14	AB5	A	1888	1896	Right-handed 310
Helix 15	AB6	A	1912	1915	Right-handed 310
Helix 16	AB7	A	2002	2008	Right-handed alpha
Helix 17	AB8	A	2033	2035	Right-handed 310
Helix 18	AB9	A	2047	2051	Right-handed 310
Helix 19	AC1	A	2204	2208	Right-handed 310
Helix 20	AC2	B	18	26	Right-handed 310
Helix 21	AC3	B	67	71	Right-handed 310
Helix 22	AC4	B	120	125	Right-handed 310
Helix 23	AC5	B	142	146	Right-handed 310
Helix 24	AC6	B	164	172	Right-handed alpha
Helix 25	AC7	B	183	187	Right-handed 310
Helix 26	AC8	B	497	501	Right-handed 310
Helix 27	AC9	B	516	520	Right-handed 310
Helix 28	AD1	B	538	546	Right-handed alpha
Helix 29	AD2	B	586	595	Right-handed alpha
Helix 30	AD3	B	609	611	Right-handed 310
Helix 31	AD4	B	621	625	Right-handed 310
Helix 32	AD5	B	697	701	Right-handed 310
Helix 33	AD6	B	1750	1757	Right-handed 310
Helix 34	AD7	B	1820	1824	Right-handed 310
Helix 35	AD8	B	1845	1850	Right-handed alpha
Helix 36	AD9	B	1912	1915	Right-handed 310
Helix 37	AE1	B	2002	2007	Right-handed alpha
Helix 38	AE2	B	2047	2051	Right-handed 310
Helix 39	AE3	B	2204	2209	Right-handed 310

There are 42 sheets in PDB entry 6MF0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2	5	first strand
Strand 2	A	84	87	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	47	53	first strand
Strand 2	A	8	14	anti-parallel
Strand 3	A	90	92	parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	74	80	first strand
Strand 2	A	174	180	parallel
Strand 3	A	154	160	anti-parallel
Strand 4	A	100	101	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	231	233	first strand
Strand 2	A	193	204	anti-parallel
Strand 3	A	253	261	parallel
Strand 4	A	294	300	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	247	249	first strand
Strand 2	A	322	328	parallel
Strand 3	A	305	311	anti-parallel
Strand 4	A	268	272	anti-parallel
Strand 5	A	287	289	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	277	279	first strand
Strand 2	A	282	284	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	422	431	first strand
Strand 2	A	381	394	anti-parallel
Strand 3	A	460	466	parallel
Strand 4	A	508	514	anti-parallel
Strand 5	A	482	485	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	476	478	first strand
Strand 2	A	529	534	anti-parallel
Strand 3	A	549	553	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	613	617	first strand
Strand 2	A	572	580	anti-parallel
Strand 3	A	634	641	parallel
Strand 4	A	674	681	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	668	670	first strand
Strand 2	A	649	653	anti-parallel
Strand 3	A	690	691	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1730	1738	first strand
Strand 2	A	1695	1707	anti-parallel
Strand 3	A	1770	1777	parallel
Strand 4	A	1812	1818	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1763	1765	first strand
Strand 2	A	1852	1858	parallel
Strand 3	A	1832	1838	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1917	1921	first strand
Strand 2	A	1874	1884	anti-parallel
Strand 3	A	1940	1946	parallel
Strand 4	A	1983	1988	anti-parallel
Strand 5	A	1963	1966	anti-parallel
Strand 6	A	1970	1973	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1933	1935	first strand
Strand 2	A	2012	2017	parallel
Strand 3	A	1994	2000	anti-parallel
Strand 4	A	1955	1958	anti-parallel
Strand 5	A	1975	1977	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2023	2024	first strand
Strand 2	A	2164	2169	anti-parallel
Strand 3	A	2071	2086	anti-parallel
Strand 4	A	2136	2157	anti-parallel
Strand 5	A	2097	2106	anti-parallel
Strand 6	A	2113	2114	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2037	2038	first strand
Strand 2	A	2071	2086	anti-parallel
Strand 3	A	2136	2157	anti-parallel
Strand 4	A	2097	2106	anti-parallel
Strand 5	A	2126	2127	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2062	2064	first strand
Strand 2	A	2160	2162	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2090	2091	first strand
Strand 2	A	2094	2095	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2190	2192	first strand
Strand 2	A	2230	2233	anti-parallel
Strand 3	A	2305	2314	anti-parallel
Strand 4	A	2253	2265	anti-parallel
Strand 5	A	2248	2250	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2190	2192	first strand
Strand 2	A	2230	2233	anti-parallel
Strand 3	A	2305	2314	anti-parallel
Strand 4	A	2253	2265	anti-parallel
Strand 5	A	2272	2273	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2238	2246	first strand
Strand 2	A	2320	2327	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2	6	first strand
Strand 2	B	84	89	parallel
Strand 3	B	135	140	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	9	14	first strand
Strand 2	B	47	52	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	74	80	first strand
Strand 2	B	174	180	parallel
Strand 3	B	154	160	anti-parallel
Strand 4	B	100	102	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	231	235	first strand
Strand 2	B	194	204	anti-parallel
Strand 3	B	253	261	parallel
Strand 4	B	294	300	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	247	249	first strand
Strand 2	B	323	328	parallel
Strand 3	B	305	311	anti-parallel
Strand 4	B	268	272	anti-parallel
Strand 5	B	288	289	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	422	431	first strand
Strand 2	B	381	394	anti-parallel
Strand 3	B	460	468	parallel
Strand 4	B	508	514	anti-parallel
Strand 5	B	482	485	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	453	454	first strand
Strand 2	B	548	554	parallel
Strand 3	B	528	534	anti-parallel
Strand 4	B	476	477	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	613	617	first strand
Strand 2	B	573	580	anti-parallel
Strand 3	B	637	641	parallel
Strand 4	B	674	678	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	628	630	first strand
Strand 2	B	707	709	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	668	670	first strand
Strand 2	B	649	653	anti-parallel
Strand 3	B	690	691	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	659	660	first strand
Strand 2	B	663	664	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1736	1737	first strand
Strand 2	B	1696	1702	anti-parallel
Strand 3	B	1770	1777	parallel
Strand 4	B	1812	1818	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1704	1707	first strand
Strand 2	B	1730	1733	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1917	1921	first strand
Strand 2	B	1874	1884	anti-parallel
Strand 3	B	1940	1946	parallel
Strand 4	B	1984	1988	anti-parallel
Strand 5	B	1964	1965	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1933	1935	first strand
Strand 2	B	2011	2017	parallel
Strand 3	B	1995	2000	anti-parallel
Strand 4	B	1954	1958	anti-parallel
Strand 5	B	1975	1978	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2037	2039	first strand
Strand 2	B	2071	2088	anti-parallel
Strand 3	B	2133	2153	anti-parallel
Strand 4	B	2100	2106	anti-parallel
Strand 5	B	2113	2114	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2062	2064	first strand
Strand 2	B	2160	2169	anti-parallel
Strand 3	B	2071	2088	anti-parallel
Strand 4	B	2133	2153	anti-parallel
Strand 5	B	2100	2106	anti-parallel
Strand 6	B	2126	2127	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2097	2098	first strand
Strand 2	B	2156	2157	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2176	2177	first strand
Strand 2	B	2320	2325	anti-parallel
Strand 3	B	2242	2246	anti-parallel
Strand 4	B	2293	2296	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2190	2192	first strand
Strand 2	B	2230	2233	anti-parallel
Strand 3	B	2305	2310	anti-parallel
Strand 4	B	2260	2265	anti-parallel
Strand 5	B	2272	2273	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2248	2249	first strand
Strand 2	B	2254	2255	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MF0

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MF0