Analysis of interatomic Contacts of Structural Units in PDB entry:
6MF9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MF9 entry

There are 2 chains in PDB entry 6MF9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1839LYS 1964
B
 GLY 1838LYS 1964
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6MF9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1843 1862Right-handed alpha
Helix 2
AA2
A
1863 1865Right-handed 310
Helix 3
AA3
A
1868 1873Right-handed 310
Helix 4
AA4
A
1883 1888Right-handed alpha
Helix 5
AA5
A
1893 1903Right-handed alpha
Helix 6
AA6
A
1908 1928Right-handed alpha
Helix 7
AA7
A
1931 1950Right-handed alpha
Helix 8
AA8
A
1953 1962Right-handed alpha
Helix 9
AA9
B
1843 1862Right-handed alpha
Helix 10
AB1
B
1863 1865Right-handed 310
Helix 11
AB2
B
1868 1873Right-handed 310
Helix 12
AB3
B
1883 1888Right-handed alpha
Helix 13
AB4
B
1893 1903Right-handed alpha
Helix 14
AB5
B
1908 1928Right-handed alpha
Helix 15
AB6
B
1931 1950Right-handed alpha
Helix 16
AB7
B
1953 1964Right-handed alpha
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There are no sheets in PDB entry 6MF9
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il