Analysis of interatomic Contacts of Structural Units in PDB entry:
6MG8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MG8 entry

There is 1 chain in PDB entry 6MG8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 58CYS 1167
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 44 helices in PDB entry 6MG8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
59 84Right-handed alpha
Helix 2
AA2
A
85 100Right-handed alpha
Helix 3
AA3
A
101 104Right-handed 310
Helix 4
AA4
A
120 133Right-handed alpha
Helix 5
AA5
A
157 160Right-handed 310
Helix 6
AA6
A
161 166Right-handed alpha
Helix 7
AA7
A
168 173Right-handed alpha
Helix 8
AA8
A
184 188Right-handed 310
Helix 9
AA9
A
204 209Right-handed alpha
Helix 10
AB1
A
221 225Right-handed 310
Helix 11
AB2
A
246 256Right-handed alpha
Helix 12
AB3
A
261 266Right-handed alpha
Helix 13
AB4
A
304 309Right-handed alpha
Helix 14
AB5
A
354 362Right-handed alpha
Helix 15
AB6
A
374 395Right-handed alpha
Helix 16
AB7
A
411 422Right-handed alpha
Helix 17
AB8
A
424 445Right-handed alpha
Helix 18
AB9
A
452 478Right-handed alpha
Helix 19
AC1
A
488 496Right-handed alpha
Helix 20
AC2
A
497 514Right-handed alpha
Helix 21
AC3
A
521 530Right-handed alpha
Helix 22
AC4
A
530 546Right-handed alpha
Helix 23
AC5
A
547 549Right-handed 310
Helix 24
AC6
A
553 589Right-handed alpha
Helix 25
AC7
A
717 730Right-handed alpha
Helix 26
AC8
A
732 755Right-handed alpha
Helix 27
AC9
A
771 784Right-handed alpha
Helix 28
AD1
A
801 811Right-handed alpha
Helix 29
AD2
A
830 851Right-handed alpha
Helix 30
AD3
A
865 874Right-handed alpha
Helix 31
AD4
A
884 889Right-handed 310
Helix 32
AD5
A
905 910Right-handed alpha
Helix 33
AD6
A
917 922Right-handed alpha
Helix 34
AD7
A
969 989Right-handed alpha
Helix 35
AD8
A
998 1004Right-handed alpha
Helix 36
AD9
A
1005 1034Right-handed alpha
Helix 37
AE1
A
1035 1061Right-handed alpha
Helix 38
AE2
A
1065 1093Right-handed alpha
Helix 39
AE3
A
1096 1109Right-handed alpha
Helix 40
AE4
A
1109 1123Right-handed alpha
Helix 41
AE5
A
1124 1129Right-handed 310
Helix 42
AE6
A
1131 1138Right-handed alpha
Helix 43
AE7
A
1138 1155Right-handed alpha
Helix 44
AE8
A
1155 1164Right-handed alpha
Back to top of page

There are 5 sheets in PDB entry 6MG8. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
346 352first strand
Strand 2
A
140 148anti-parallel
Strand 3
A
403 408anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 178first strand
Strand 2
A
181 183anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
231 232first strand
Strand 2
A
240 241anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
340 342anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
959 964first strand
Strand 2
A
787 793anti-parallel
Strand 3
A
994 997anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il