Analysis of interatomic Contacts of Structural Units in PDB entry:
6MGB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MGB entry

There is 1 chain in PDB entry 6MGB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -5GLY 315
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 6MGB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 14Right-handed alpha
Helix 2
AA2
A
16 22Right-handed alpha
Helix 3
AA3
A
44 58Right-handed alpha
Helix 4
AA4
A
98 107Right-handed alpha
Helix 5
AA5
A
111 128Right-handed alpha
Helix 6
AA6
A
160 165Right-handed alpha
Helix 7
AA7
A
171 184Right-handed alpha
Helix 8
AA8
A
194 199Right-handed alpha
Helix 9
AA9
A
205 209Right-handed 310
Helix 10
AB1
A
223 229Right-handed alpha
Helix 11
AB2
A
239 248Right-handed alpha
Helix 12
AB3
A
280 290Right-handed alpha
Helix 13
AB4
A
305 315Right-handed alpha
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There are 2 sheets in PDB entry 6MGB. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
25 27first strand
Strand 2
A
3 5parallel
Strand 3
A
37 41parallel
Strand 4
A
61 66parallel
Strand 5
A
82 86anti-parallel
Strand 6
A
294 296anti-parallel
Strand 7
A
303 304anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
216 218first strand
Strand 2
A
188 192parallel
Strand 3
A
150 154parallel
Strand 4
A
233 236parallel
Strand 5
A
251 254parallel
Strand 6
A
267 268parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il