Analysis of interatomic Contacts of Structural Units in PDB entry:
6MGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MGC entry

There is 1 chain in PDB entry 6MGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 1HIS 323
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 6MGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 11Right-handed alpha
Helix 2
AA2
A
14 20Right-handed alpha
Helix 3
AA3
A
45 47Right-handed 310
Helix 4
AA4
A
48 59Right-handed alpha
Helix 5
AA5
A
75 79Right-handed 310
Helix 6
AA6
A
100 108Right-handed alpha
Helix 7
AA7
A
108 114Right-handed alpha
Helix 8
AA8
A
115 129Right-handed alpha
Helix 9
AA9
A
160 165Right-handed alpha
Helix 10
AB1
A
169 184Right-handed alpha
Helix 11
AB2
A
194 199Right-handed alpha
Helix 12
AB3
A
223 229Right-handed alpha
Helix 13
AB4
A
240 248Right-handed alpha
Helix 14
AB5
A
272 281Right-handed alpha
Helix 15
AB6
A
284 295Right-handed alpha
Helix 16
AB7
A
309 322Right-handed alpha
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There are 2 sheets in PDB entry 6MGC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 25first strand
Strand 2
A
2 4parallel
Strand 3
A
38 42parallel
Strand 4
A
62 67parallel
Strand 5
A
84 88anti-parallel
Strand 6
A
297 300anti-parallel
Strand 7
A
307 308anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 218first strand
Strand 2
A
188 192parallel
Strand 3
A
150 154parallel
Strand 4
A
233 236parallel
Strand 5
A
252 254parallel
Strand 6
A
267 268parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il