Analysis of interatomic Contacts of Structural Units in PDB entry:
6MGI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MGI entry

There are 2 chains in PDB entry 6MGI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 35GLY 970
B
 ILE 35GLY 970
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 89 helices in PDB entry 6MGI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 54Right-handed alpha
Helix 2
AA2
A
54 75Right-handed alpha
Helix 3
AA3
A
77 88Right-handed alpha
Helix 4
AA4
A
91 124Right-handed alpha
Helix 5
AA5
A
142 153Right-handed alpha
Helix 6
AA6
A
157 167Right-handed alpha
Helix 7
AA7
A
183 201Right-handed alpha
Helix 8
AA8
A
206 226Right-handed alpha
Helix 9
AA9
A
236 251Right-handed alpha
Helix 10
AB1
A
251 269Right-handed alpha
Helix 11
AB2
A
300 330Right-handed alpha
Helix 12
AB3
A
336 350Right-handed alpha
Helix 13
AB4
A
369 395Right-handed alpha
Helix 14
AB5
A
408 426Right-handed alpha
Helix 15
AB6
A
428 433Right-handed alpha
Helix 16
AB7
A
434 447Right-handed alpha
Helix 17
AB8
A
448 450Right-handed 310
Helix 18
AB9
A
459 473Right-handed alpha
Helix 19
AC1
A
482 496Right-handed alpha
Helix 20
AC2
A
508 524Right-handed alpha
Helix 21
AC3
A
525 527Right-handed 310
Helix 22
AC4
A
539 552Right-handed alpha
Helix 23
AC5
A
567 573Right-handed alpha
Helix 24
AC6
A
573 583Right-handed alpha
Helix 25
AC7
A
584 592Right-handed alpha
Helix 26
AC8
A
601 608Right-handed alpha
Helix 27
AC9
A
609 631Right-handed alpha
Helix 28
AD1
A
644 648Right-handed 310
Helix 29
AD2
A
651 658Right-handed alpha
Helix 30
AD3
A
674 682Right-handed alpha
Helix 31
AD4
A
683 704Right-handed alpha
Helix 32
AD5
A
710 733Right-handed alpha
Helix 33
AD6
A
737 746Right-handed alpha
Helix 34
AD7
A
747 755Right-handed 310
Helix 35
AD8
A
773 784Right-handed alpha
Helix 36
AD9
A
787 792Right-handed alpha
Helix 37
AE1
A
793 805Right-handed alpha
Helix 38
AE2
A
807 819Right-handed alpha
Helix 39
AE3
A
819 835Right-handed alpha
Helix 40
AE4
A
837 849Right-handed alpha
Helix 41
AE5
A
850 852Right-handed 310
Helix 42
AE6
A
853 875Right-handed alpha
Helix 43
AE7
A
884 914Right-handed alpha
Helix 44
AE8
A
938 942Right-handed 310
Helix 45
AE9
A
950 967Right-handed alpha
Helix 46
AF1
B
36 54Right-handed alpha
Helix 47
AF2
B
54 73Right-handed alpha
Helix 48
AF3
B
76 89Right-handed alpha
Helix 49
AF4
B
91 125Right-handed alpha
Helix 50
AF5
B
142 153Right-handed alpha
Helix 51
AF6
B
157 167Right-handed alpha
Helix 52
AF7
B
183 200Right-handed alpha
Helix 53
AF8
B
206 226Right-handed alpha
Helix 54
AF9
B
236 251Right-handed alpha
Helix 55
AG1
B
251 269Right-handed alpha
Helix 56
AG2
B
300 330Right-handed alpha
Helix 57
AG3
B
336 350Right-handed alpha
Helix 58
AG4
B
369 395Right-handed alpha
Helix 59
AG5
B
408 426Right-handed alpha
Helix 60
AG6
B
428 433Right-handed alpha
Helix 61
AG7
B
434 447Right-handed alpha
Helix 62
AG8
B
448 450Right-handed 310
Helix 63
AG9
B
459 474Right-handed alpha
Helix 64
AH1
B
477 481Right-handed 310
Helix 65
AH2
B
482 496Right-handed alpha
Helix 66
AH3
B
508 524Right-handed alpha
Helix 67
AH4
B
525 527Right-handed 310
Helix 68
AH5
B
539 553Right-handed alpha
Helix 69
AH6
B
567 573Right-handed alpha
Helix 70
AH7
B
573 583Right-handed alpha
Helix 71
AH8
B
584 592Right-handed alpha
Helix 72
AH9
B
601 608Right-handed alpha
Helix 73
AI1
B
609 631Right-handed alpha
Helix 74
AI2
B
651 659Right-handed alpha
Helix 75
AI3
B
674 682Right-handed alpha
Helix 76
AI4
B
683 704Right-handed alpha
Helix 77
AI5
B
710 733Right-handed alpha
Helix 78
AI6
B
737 746Right-handed alpha
Helix 79
AI7
B
747 755Right-handed 310
Helix 80
AI8
B
773 784Right-handed alpha
Helix 81
AI9
B
787 792Right-handed alpha
Helix 82
AJ1
B
793 805Right-handed alpha
Helix 83
AJ2
B
807 819Right-handed alpha
Helix 84
AJ3
B
819 835Right-handed alpha
Helix 85
AJ4
B
837 849Right-handed alpha
Helix 86
AJ5
B
853 876Right-handed alpha
Helix 87
AJ6
B
885 914Right-handed alpha
Helix 88
AJ7
B
938 942Right-handed 310
Helix 89
AJ8
B
950 967Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6MGI. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
170 175first strand
Strand 2
A
283 287parallel
Strand 3
A
452 458parallel
Strand 4
A
529 535parallel
Strand 5
A
561 565parallel
Strand 6
A
594 600parallel
Strand 7
A
634 640parallel
Strand 8
A
668 673parallel
Strand 9
A
170 175parallel
Back to list of sheets
Back to top of page

There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
169 175first strand
Strand 2
B
283 287parallel
Strand 3
B
452 458parallel
Strand 4
B
529 535parallel
Strand 5
B
561 565parallel
Strand 6
B
594 600parallel
Strand 7
B
634 640parallel
Strand 8
B
667 673parallel
Strand 9
B
169 175parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il