Analysis of interatomic Contacts of Structural Units in PDB entry:
6MGU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MGU entry

There are 2 chains in PDB entry 6MGU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2SER 486
B
 ASN -1SER 486
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 6MGU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 4Right-handed alpha
Helix 2
AA2
A
12 14Right-handed 310
Helix 3
AA3
A
26 30Right-handed 310
Helix 4
AA4
A
56 66Right-handed alpha
Helix 5
AA5
A
77 90Right-handed alpha
Helix 6
AA6
A
232 243Right-handed alpha
Helix 7
AA7
A
257 271Right-handed alpha
Helix 8
AA8
A
283 294Right-handed alpha
Helix 9
AA9
A
309 314Right-handed alpha
Helix 10
AB1
A
319 334Right-handed alpha
Helix 11
AB2
A
346 356Right-handed alpha
Helix 12
AB3
A
364 369Right-handed alpha
Helix 13
AB4
A
393 398Right-handed alpha
Helix 14
AB5
A
427 447Right-handed alpha
Helix 15
AB6
A
450 458Right-handed alpha
Helix 16
AB7
A
464 472Right-handed alpha
Helix 17
AB8
B
0 4Right-handed alpha
Helix 18
AB9
B
12 14Right-handed 310
Helix 19
AC1
B
26 30Right-handed 310
Helix 20
AC2
B
56 67Right-handed alpha
Helix 21
AC3
B
77 90Right-handed alpha
Helix 22
AC4
B
232 243Right-handed alpha
Helix 23
AC5
B
257 271Right-handed alpha
Helix 24
AC6
B
283 294Right-handed alpha
Helix 25
AC7
B
309 314Right-handed alpha
Helix 26
AC8
B
319 333Right-handed alpha
Helix 27
AC9
B
346 356Right-handed alpha
Helix 28
AD1
B
364 369Right-handed alpha
Helix 29
AD2
B
393 398Right-handed alpha
Helix 30
AD3
B
427 447Right-handed alpha
Helix 31
AD4
B
450 458Right-handed alpha
Helix 32
AD5
B
464 472Right-handed alpha
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There are 8 sheets in PDB entry 6MGU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 18first strand
Strand 2
A
460 462anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 37first strand
Strand 2
A
40 42anti-parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 48first strand
Strand 2
A
69 72parallel
Strand 3
A
224 228parallel
Strand 4
A
247 251parallel
Strand 5
A
275 281parallel
Strand 6
A
297 300parallel
Strand 7
A
338 341parallel
Strand 8
A
360 363parallel
Strand 9
A
46 48parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
377 380first strand
Strand 2
A
383 389anti-parallel
Strand 3
A
419 423anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 18first strand
Strand 2
B
460 462anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 37first strand
Strand 2
B
40 42anti-parallel
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There are 9 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 48first strand
Strand 2
B
69 72parallel
Strand 3
B
224 227parallel
Strand 4
B
247 251parallel
Strand 5
B
275 281parallel
Strand 6
B
297 300parallel
Strand 7
B
338 341parallel
Strand 8
B
360 363parallel
Strand 9
B
46 48parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
377 380first strand
Strand 2
B
383 389anti-parallel
Strand 3
B
419 423anti-parallel
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