Analysis of interatomic Contacts of Structural Units in PDB entry:
6MGV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MGV entry

There are 2 chains in PDB entry 6MGV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LYS 718
B
 THR 3LYS 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 6MGV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 29Right-handed alpha
Helix 2
AA2
A
30 33Right-handed 310
Helix 3
AA3
A
34 39Right-handed alpha
Helix 4
AA4
A
74 80Right-handed alpha
Helix 5
AA5
A
83 92Right-handed alpha
Helix 6
AA6
A
92 121Right-handed alpha
Helix 7
AA7
A
157 195Right-handed alpha
Helix 8
AA8
A
198 201Right-handed 310
Helix 9
AA9
A
216 229Right-handed alpha
Helix 10
AB1
A
242 269Right-handed alpha
Helix 11
AB2
A
290 313Right-handed alpha
Helix 12
AB3
A
314 317Right-handed 310
Helix 13
AB4
A
329 337Right-handed alpha
Helix 14
AB5
A
360 366Right-handed 310
Helix 15
AB6
A
367 369Right-handed 310
Helix 16
AB7
A
370 388Right-handed alpha
Helix 17
AB8
A
389 400Right-handed alpha
Helix 18
AB9
A
422 438Right-handed alpha
Helix 19
AC1
A
440 452Right-handed alpha
Helix 20
AC2
A
456 476Right-handed alpha
Helix 21
AC3
A
477 489Right-handed alpha
Helix 22
AC4
A
504 512Right-handed alpha
Helix 23
AC5
A
512 524Right-handed alpha
Helix 24
AC6
A
524 532Right-handed alpha
Helix 25
AC7
A
534 548Right-handed alpha
Helix 26
AC8
A
554 559Right-handed alpha
Helix 27
AC9
A
565 584Right-handed alpha
Helix 28
AD1
A
587 589Right-handed 310
Helix 29
AD2
A
590 612Right-handed alpha
Helix 30
AD3
A
623 646Right-handed alpha
Helix 31
AD4
A
654 659Right-handed alpha
Helix 32
AD5
A
659 677Right-handed alpha
Helix 33
AD6
A
677 682Right-handed alpha
Helix 34
AD7
A
684 699Right-handed alpha
Helix 35
AD8
A
703 710Right-handed alpha
Helix 36
AD9
B
4 29Right-handed alpha
Helix 37
AE1
B
30 33Right-handed 310
Helix 38
AE2
B
34 39Right-handed alpha
Helix 39
AE3
B
74 80Right-handed alpha
Helix 40
AE4
B
83 92Right-handed alpha
Helix 41
AE5
B
92 121Right-handed alpha
Helix 42
AE6
B
157 195Right-handed alpha
Helix 43
AE7
B
198 201Right-handed 310
Helix 44
AE8
B
216 229Right-handed alpha
Helix 45
AE9
B
242 269Right-handed alpha
Helix 46
AF1
B
290 313Right-handed alpha
Helix 47
AF2
B
314 317Right-handed 310
Helix 48
AF3
B
329 337Right-handed alpha
Helix 49
AF4
B
360 366Right-handed 310
Helix 50
AF5
B
367 369Right-handed 310
Helix 51
AF6
B
370 388Right-handed alpha
Helix 52
AF7
B
389 400Right-handed alpha
Helix 53
AF8
B
422 438Right-handed alpha
Helix 54
AF9
B
440 452Right-handed alpha
Helix 55
AG1
B
456 476Right-handed alpha
Helix 56
AG2
B
477 489Right-handed alpha
Helix 57
AG3
B
504 512Right-handed alpha
Helix 58
AG4
B
512 524Right-handed alpha
Helix 59
AG5
B
524 532Right-handed alpha
Helix 60
AG6
B
534 548Right-handed alpha
Helix 61
AG7
B
554 559Right-handed alpha
Helix 62
AG8
B
565 584Right-handed alpha
Helix 63
AG9
B
587 589Right-handed 310
Helix 64
AH1
B
590 612Right-handed alpha
Helix 65
AH2
B
623 646Right-handed alpha
Helix 66
AH3
B
654 659Right-handed alpha
Helix 67
AH4
B
659 677Right-handed alpha
Helix 68
AH5
B
677 682Right-handed alpha
Helix 69
AH6
B
684 699Right-handed alpha
Helix 70
AH7
B
703 710Right-handed alpha
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There are 2 sheets in PDB entry 6MGV. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 240first strand
Strand 2
A
319 327anti-parallel
Strand 3
A
203 207anti-parallel
Strand 4
A
349 352anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 240first strand
Strand 2
B
319 327anti-parallel
Strand 3
B
203 207anti-parallel
Strand 4
B
349 352anti-parallel
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