Analysis of interatomic Contacts of Structural Units in PDB entry:
6MGW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MGW entry

There are 2 chains in PDB entry 6MGW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3LYS 718
B
 THR 3LYS 718
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 6MGW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 29Right-handed alpha
Helix 2
AA2
A
30 33Right-handed 310
Helix 3
AA3
A
34 39Right-handed alpha
Helix 4
AA4
A
71 73Right-handed 310
Helix 5
AA5
A
74 79Right-handed alpha
Helix 6
AA6
A
83 92Right-handed alpha
Helix 7
AA7
A
92 121Right-handed alpha
Helix 8
AA8
A
157 194Right-handed alpha
Helix 9
AA9
A
198 201Right-handed 310
Helix 10
AB1
A
216 229Right-handed alpha
Helix 11
AB2
A
242 269Right-handed alpha
Helix 12
AB3
A
290 314Right-handed alpha
Helix 13
AB4
A
315 317Right-handed 310
Helix 14
AB5
A
329 337Right-handed alpha
Helix 15
AB6
A
360 366Right-handed 310
Helix 16
AB7
A
367 369Right-handed 310
Helix 17
AB8
A
370 388Right-handed alpha
Helix 18
AB9
A
389 400Right-handed alpha
Helix 19
AC1
A
421 438Right-handed alpha
Helix 20
AC2
A
440 452Right-handed alpha
Helix 21
AC3
A
456 476Right-handed alpha
Helix 22
AC4
A
477 489Right-handed alpha
Helix 23
AC5
A
504 512Right-handed alpha
Helix 24
AC6
A
512 524Right-handed alpha
Helix 25
AC7
A
524 532Right-handed alpha
Helix 26
AC8
A
534 548Right-handed alpha
Helix 27
AC9
A
554 559Right-handed alpha
Helix 28
AD1
A
565 584Right-handed alpha
Helix 29
AD2
A
587 589Right-handed 310
Helix 30
AD3
A
590 612Right-handed alpha
Helix 31
AD4
A
623 646Right-handed alpha
Helix 32
AD5
A
654 659Right-handed alpha
Helix 33
AD6
A
659 677Right-handed alpha
Helix 34
AD7
A
678 681Right-handed 310
Helix 35
AD8
A
684 699Right-handed alpha
Helix 36
AD9
A
703 710Right-handed alpha
Helix 37
AE1
B
4 29Right-handed alpha
Helix 38
AE2
B
30 33Right-handed 310
Helix 39
AE3
B
34 39Right-handed alpha
Helix 40
AE4
B
71 73Right-handed 310
Helix 41
AE5
B
74 79Right-handed alpha
Helix 42
AE6
B
83 92Right-handed alpha
Helix 43
AE7
B
92 121Right-handed alpha
Helix 44
AE8
B
157 194Right-handed alpha
Helix 45
AE9
B
198 201Right-handed 310
Helix 46
AF1
B
216 229Right-handed alpha
Helix 47
AF2
B
242 269Right-handed alpha
Helix 48
AF3
B
290 314Right-handed alpha
Helix 49
AF4
B
315 317Right-handed 310
Helix 50
AF5
B
329 337Right-handed alpha
Helix 51
AF6
B
360 366Right-handed 310
Helix 52
AF7
B
367 369Right-handed 310
Helix 53
AF8
B
370 388Right-handed alpha
Helix 54
AF9
B
389 400Right-handed alpha
Helix 55
AG1
B
421 438Right-handed alpha
Helix 56
AG2
B
440 452Right-handed alpha
Helix 57
AG3
B
456 476Right-handed alpha
Helix 58
AG4
B
477 489Right-handed alpha
Helix 59
AG5
B
504 512Right-handed alpha
Helix 60
AG6
B
512 524Right-handed alpha
Helix 61
AG7
B
524 532Right-handed alpha
Helix 62
AG8
B
534 548Right-handed alpha
Helix 63
AG9
B
554 559Right-handed alpha
Helix 64
AH1
B
565 584Right-handed alpha
Helix 65
AH2
B
587 589Right-handed 310
Helix 66
AH3
B
590 612Right-handed alpha
Helix 67
AH4
B
623 646Right-handed alpha
Helix 68
AH5
B
654 659Right-handed alpha
Helix 69
AH6
B
659 677Right-handed alpha
Helix 70
AH7
B
678 681Right-handed 310
Helix 71
AH8
B
684 699Right-handed alpha
Helix 72
AH9
B
703 710Right-handed alpha
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There are 2 sheets in PDB entry 6MGW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
233 240first strand
Strand 2
A
319 327anti-parallel
Strand 3
A
203 207anti-parallel
Strand 4
A
349 352anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
233 240first strand
Strand 2
B
319 327anti-parallel
Strand 3
B
203 207anti-parallel
Strand 4
B
349 352anti-parallel
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