Analysis of interatomic Contacts of Structural Units in PDB entry:
6MH4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MH4 entry

There are 2 chains in PDB entry 6MH4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 374
B
 MET 1TYR 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 6MH4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
38 50Right-handed alpha
Helix 3
AA3
A
58 60Right-handed 310
Helix 4
AA4
A
61 66Right-handed alpha
Helix 5
AA5
A
67 69Right-handed 310
Helix 6
AA6
A
75 84Right-handed alpha
Helix 7
AA7
A
97 99Right-handed 310
Helix 8
AA8
A
100 110Right-handed alpha
Helix 9
AA9
A
119 136Right-handed alpha
Helix 10
AB1
A
144 155Right-handed alpha
Helix 11
AB2
A
158 160Right-handed 310
Helix 12
AB3
A
180 185Right-handed 310
Helix 13
AB4
A
186 191Right-handed alpha
Helix 14
AB5
A
193 197Right-handed 310
Helix 15
AB6
A
199 209Right-handed alpha
Helix 16
AB7
A
209 223Right-handed alpha
Helix 17
AB8
A
226 228Right-handed 310
Helix 18
AB9
A
260 270Right-handed alpha
Helix 19
AC1
A
282 287Right-handed alpha
Helix 20
AC2
A
299 312Right-handed alpha
Helix 21
AC3
A
314 332Right-handed alpha
Helix 22
AC4
A
338 351Right-handed alpha
Helix 23
AC5
A
358 372Right-handed alpha
Helix 24
AC6
B
11 24Right-handed alpha
Helix 25
AC7
B
38 50Right-handed alpha
Helix 26
AC8
B
62 66Right-handed 310
Helix 27
AC9
B
75 84Right-handed alpha
Helix 28
AD1
B
97 99Right-handed 310
Helix 29
AD2
B
100 110Right-handed alpha
Helix 30
AD3
B
119 137Right-handed alpha
Helix 31
AD4
B
144 154Right-handed alpha
Helix 32
AD5
B
158 160Right-handed 310
Helix 33
AD6
B
180 185Right-handed 310
Helix 34
AD7
B
186 191Right-handed alpha
Helix 35
AD8
B
200 209Right-handed alpha
Helix 36
AD9
B
209 223Right-handed alpha
Helix 37
AE1
B
226 228Right-handed 310
Helix 38
AE2
B
260 269Right-handed alpha
Helix 39
AE3
B
282 287Right-handed alpha
Helix 40
AE4
B
299 312Right-handed alpha
Helix 41
AE5
B
314 332Right-handed alpha
Helix 42
AE6
B
336 351Right-handed alpha
Helix 43
AE7
B
358 372Right-handed alpha
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There are 4 sheets in PDB entry 6MH4. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
53 56parallel
Strand 3
A
28 34parallel
Strand 4
A
2 7parallel
Strand 5
A
90 93parallel
Strand 6
A
113 116parallel
Strand 7
A
140 142parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 234first strand
Strand 2
A
162 169parallel
Strand 3
A
240 246anti-parallel
Strand 4
A
251 255anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
71 74first strand
Strand 2
B
53 56parallel
Strand 3
B
28 34parallel
Strand 4
B
2 7parallel
Strand 5
B
90 93parallel
Strand 6
B
113 116parallel
Strand 7
B
140 142parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
230 234first strand
Strand 2
B
162 169parallel
Strand 3
B
240 246anti-parallel
Strand 4
B
251 255anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il