Analysis of interatomic Contacts of Structural Units in PDB entry:
6MH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MH5 entry

There are 2 chains in PDB entry 6MH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1TYR 374
B
 MET 1GLU 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 6MH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 24Right-handed alpha
Helix 2
AA2
A
38 50Right-handed alpha
Helix 3
AA3
A
58 60Right-handed 310
Helix 4
AA4
A
61 66Right-handed alpha
Helix 5
AA5
A
75 84Right-handed alpha
Helix 6
AA6
A
100 110Right-handed alpha
Helix 7
AA7
A
118 125Right-handed alpha
Helix 8
AA8
A
125 136Right-handed alpha
Helix 9
AA9
A
146 155Right-handed alpha
Helix 10
AB1
A
158 160Right-handed 310
Helix 11
AB2
A
180 184Right-handed 310
Helix 12
AB3
A
186 191Right-handed alpha
Helix 13
AB4
A
193 197Right-handed 310
Helix 14
AB5
A
199 208Right-handed alpha
Helix 15
AB6
A
209 223Right-handed alpha
Helix 16
AB7
A
260 270Right-handed alpha
Helix 17
AB8
A
299 312Right-handed alpha
Helix 18
AB9
A
314 332Right-handed alpha
Helix 19
AC1
A
336 351Right-handed alpha
Helix 20
AC2
A
358 372Right-handed alpha
Helix 21
AC3
B
11 24Right-handed alpha
Helix 22
AC4
B
38 50Right-handed alpha
Helix 23
AC5
B
58 60Right-handed 310
Helix 24
AC6
B
61 66Right-handed alpha
Helix 25
AC7
B
75 85Right-handed alpha
Helix 26
AC8
B
96 99Right-handed 310
Helix 27
AC9
B
100 110Right-handed alpha
Helix 28
AD1
B
119 126Right-handed alpha
Helix 29
AD2
B
127 132Right-handed alpha
Helix 30
AD3
B
144 154Right-handed alpha
Helix 31
AD4
B
158 160Right-handed 310
Helix 32
AD5
B
178 183Right-handed alpha
Helix 33
AD6
B
186 192Right-handed alpha
Helix 34
AD7
B
199 209Right-handed alpha
Helix 35
AD8
B
209 223Right-handed alpha
Helix 36
AD9
B
226 228Right-handed 310
Helix 37
AE1
B
260 267Right-handed alpha
Helix 38
AE2
B
282 287Right-handed alpha
Helix 39
AE3
B
299 312Right-handed alpha
Helix 40
AE4
B
314 332Right-handed alpha
Helix 41
AE5
B
338 351Right-handed alpha
Helix 42
AE6
B
358 372Right-handed alpha
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There are 4 sheets in PDB entry 6MH5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 74first strand
Strand 2
A
53 56parallel
Strand 3
A
28 34parallel
Strand 4
A
2 6parallel
Strand 5
A
90 93parallel
Strand 6
A
113 116parallel
Strand 7
A
140 142parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
251 255first strand
Strand 2
A
240 246anti-parallel
Strand 3
A
162 169anti-parallel
Strand 4
A
231 234parallel
Strand 5
A
292 293anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 74first strand
Strand 2
B
53 56parallel
Strand 3
B
28 34parallel
Strand 4
B
2 6parallel
Strand 5
B
90 93parallel
Strand 6
B
113 116parallel
Strand 7
B
140 142parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
251 255first strand
Strand 2
B
240 246anti-parallel
Strand 3
B
162 169anti-parallel
Strand 4
B
230 234parallel
Strand 5
B
292 293anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il