Analysis of interatomic Contacts of Structural Units in PDB entry:
6MHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MHJ entry

There is 1 chain in PDB entry 6MHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
LYS 547LYS 871
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 6MHJ. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
549 557Right-handed alpha
Helix 2
AA2
A
571 578Right-handed alpha
Helix 3
AA3
A
587 596Right-handed alpha
Helix 4
AA4
A
602 619Right-handed alpha
Helix 5
AA5
A
636 642Right-handed alpha
Helix 6
AA6
A
651 660Right-handed alpha
Helix 7
AA7
A
661 665Right-handed 310
Helix 8
AA8
A
678 686Right-handed alpha
Helix 9
AA9
A
691 721Right-handed alpha
Helix 10
AB1
A
721 752Right-handed alpha
Helix 11
AB2
A
755 762Right-handed alpha
Helix 12
AB3
A
765 800Right-handed alpha
Helix 13
AB4
A
800 826Right-handed alpha
Helix 14
AB5
A
827 831Right-handed 310
Helix 15
AB6
A
834 845Right-handed alpha
Helix 16
AB7
A
852 856Right-handed 310
Helix 17
AB8
A
859 871Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 6MHJ.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
567 569first strand
Strand 2
A
581 583parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il