Analysis of interatomic Contacts of Structural Units in PDB entry:
6MHL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MHL entry

There are 2 chains in PDB entry 6MHL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	TYR 1	PRO 590
B	TYR 1	PRO 590

There are 47 helices in PDB entry 6MHL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	20	30	Right-handed alpha
Helix 2	AA2	A	39	45	Right-handed alpha
Helix 3	AA3	A	49	54	Right-handed alpha
Helix 4	AA4	A	72	77	Right-handed 310
Helix 5	AA5	A	79	86	Right-handed alpha
Helix 6	AA6	A	87	105	Right-handed alpha
Helix 7	AA7	A	107	111	Right-handed 310
Helix 8	AA8	A	124	129	Right-handed 310
Helix 9	AA9	A	141	150	Right-handed alpha
Helix 10	AB1	A	152	163	Right-handed alpha
Helix 11	AB2	A	173	175	Right-handed 310
Helix 12	AB3	A	176	191	Right-handed alpha
Helix 13	AB4	A	250	256	Right-handed alpha
Helix 14	AB5	A	283	299	Right-handed alpha
Helix 15	AB6	A	301	303	Right-handed 310
Helix 16	AB7	A	317	332	Right-handed alpha
Helix 17	AB8	A	345	350	Right-handed alpha
Helix 18	AB9	A	352	354	Right-handed 310
Helix 19	AC1	A	355	370	Right-handed alpha
Helix 20	AC2	A	453	471	Right-handed alpha
Helix 21	AC3	A	476	487	Right-handed alpha
Helix 22	AC4	A	501	515	Right-handed alpha
Helix 23	AC5	A	546	558	Right-handed alpha
Helix 24	AC6	B	20	30	Right-handed alpha
Helix 25	AC7	B	50	55	Right-handed alpha
Helix 26	AC8	B	72	77	Right-handed 310
Helix 27	AC9	B	79	86	Right-handed alpha
Helix 28	AD1	B	87	104	Right-handed alpha
Helix 29	AD2	B	107	111	Right-handed 310
Helix 30	AD3	B	124	129	Right-handed 310
Helix 31	AD4	B	141	150	Right-handed alpha
Helix 32	AD5	B	152	163	Right-handed alpha
Helix 33	AD6	B	173	175	Right-handed 310
Helix 34	AD7	B	176	191	Right-handed alpha
Helix 35	AD8	B	250	256	Right-handed alpha
Helix 36	AD9	B	283	299	Right-handed alpha
Helix 37	AE1	B	301	303	Right-handed 310
Helix 38	AE2	B	317	332	Right-handed alpha
Helix 39	AE3	B	345	350	Right-handed alpha
Helix 40	AE4	B	352	354	Right-handed 310
Helix 41	AE5	B	355	371	Right-handed alpha
Helix 42	AE6	B	453	471	Right-handed alpha
Helix 43	AE7	B	476	487	Right-handed alpha
Helix 44	AE8	B	501	515	Right-handed alpha
Helix 45	AE9	B	532	537	Right-handed alpha
Helix 46	AF1	B	545	558	Right-handed alpha
Helix 47	AF2	B	563	568	Right-handed 310

There are 11 sheets in PDB entry 6MHL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 22 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	393	395	first strand
Strand 2	A	340	343	parallel
Strand 3	A	305	309	parallel
Strand 4	A	410	416	parallel
Strand 5	A	421	428	anti-parallel
Strand 6	A	262	271	anti-parallel
Strand 7	A	6	14	anti-parallel
Strand 8	A	241	249	anti-parallel
Strand 9	A	196	203	anti-parallel
Strand 10	A	114	120	parallel
Strand 11	A	168	172	parallel
Strand 12	B	168	172	anti-parallel
Strand 13	B	114	120	parallel
Strand 14	B	196	203	parallel
Strand 15	B	241	249	anti-parallel
Strand 16	B	6	14	anti-parallel
Strand 17	B	262	271	anti-parallel
Strand 18	B	421	428	anti-parallel
Strand 19	B	410	416	anti-parallel
Strand 20	B	305	309	parallel
Strand 21	B	340	343	parallel
Strand 22	B	393	395	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	37	first strand
Strand 2	A	61	62	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	58	59	first strand
Strand 2	A	212	213	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	70	71	first strand
Strand 2	A	586	587	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	372	373	first strand
Strand 2	A	400	401	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	445	451	first strand
Strand 2	A	493	499	anti-parallel
Strand 3	A	522	523	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	37	first strand
Strand 2	B	61	62	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	58	59	first strand
Strand 2	B	212	213	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	70	71	first strand
Strand 2	B	586	587	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	372	373	first strand
Strand 2	B	400	401	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	445	451	first strand
Strand 2	B	493	499	anti-parallel
Strand 3	B	521	523	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MHL

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MHL