Analysis of interatomic Contacts of Structural Units in PDB entry:
6MI2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MI2 entry

There are 6 chains in PDB entry 6MI2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 1LYS 217
B
 SER 1PRO 210
D
 GLU 1LYS 217
E
 SER 1PRO 210
F
 CYS 28PRO 160
C
 ASP 26GLN 168
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6MI2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
28 32Right-handed 310
Helix 2
AA2
A
87 91Right-handed 310
Helix 3
AA3
B
26 30Right-handed 310
Helix 4
AA4
B
78 82Right-handed 310
Helix 5
AA5
B
123 129Right-handed alpha
Helix 6
AA6
B
183 188Right-handed alpha
Helix 7
AA7
D
28 32Right-handed 310
Helix 8
AA8
D
87 91Right-handed 310
Helix 9
AA9
D
189 193Right-handed 310
Helix 10
AB1
E
78 82Right-handed 310
Helix 11
AB2
E
123 128Right-handed alpha
Helix 12
AB3
E
183 188Right-handed alpha
Helix 13
AB4
C
26 31Right-handed 310
Helix 14
AB5
C
139 143Right-handed 310
Helix 15
AB6
C
161 167Right-handed alpha
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There are 37 sheets in PDB entry 6MI2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 6first strand
Strand 2
A
19 25anti-parallel
Strand 3
A
78 82anti-parallel
Strand 4
A
69 73anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 12first strand
Strand 2
A
110 114parallel
Strand 3
A
92 98anti-parallel
Strand 4
A
34 39anti-parallel
Strand 5
A
45 52anti-parallel
Strand 6
A
57 58anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
141 148anti-parallel
Strand 3
A
179 185anti-parallel
Strand 4
A
166 168anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
123 127first strand
Strand 2
A
141 148anti-parallel
Strand 3
A
179 185anti-parallel
Strand 4
A
172 173anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
153 157first strand
Strand 2
A
197 203anti-parallel
Strand 3
A
208 214anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 12first strand
Strand 2
B
103 107parallel
Strand 3
B
84 91anti-parallel
Strand 4
B
32 37anti-parallel
Strand 5
B
44 47anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 12first strand
Strand 2
B
103 107parallel
Strand 3
B
84 91anti-parallel
Strand 4
B
96 99anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
18 23first strand
Strand 2
B
69 74anti-parallel
Strand 3
B
61 66anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
132 141anti-parallel
Strand 3
B
174 182anti-parallel
Strand 4
B
161 163anti-parallel
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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
116 120first strand
Strand 2
B
132 141anti-parallel
Strand 3
B
174 182anti-parallel
Strand 4
B
167 168anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 152first strand
Strand 2
B
193 199anti-parallel
Strand 3
B
202 208anti-parallel
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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
3 6first strand
Strand 2
D
18 25anti-parallel
Strand 3
D
78 83anti-parallel
Strand 4
D
69 73anti-parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
110 114parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
34 39anti-parallel
Strand 5
D
45 52anti-parallel
Strand 6
D
57 60anti-parallel
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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
10 12first strand
Strand 2
D
110 114parallel
Strand 3
D
92 98anti-parallel
Strand 4
D
105 106anti-parallel
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There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
123 126first strand
Strand 2
D
139 148anti-parallel
Strand 3
D
179 187anti-parallel
Strand 4
D
166 168anti-parallel
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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
123 126first strand
Strand 2
D
139 148anti-parallel
Strand 3
D
179 187anti-parallel
Strand 4
D
172 173anti-parallel
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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
197 203first strand
Strand 2
D
208 214anti-parallel
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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 12first strand
Strand 2
E
103 107parallel
Strand 3
E
83 91anti-parallel
Strand 4
E
32 37anti-parallel
Strand 5
E
44 47anti-parallel
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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
9 12first strand
Strand 2
E
103 107parallel
Strand 3
E
83 91anti-parallel
Strand 4
E
96 99anti-parallel
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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
18 23first strand
Strand 2
E
69 74anti-parallel
Strand 3
E
64 66anti-parallel
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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
116 120first strand
Strand 2
E
132 141anti-parallel
Strand 3
E
174 176anti-parallel
Strand 4
E
167 168anti-parallel
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There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
116 120first strand
Strand 2
E
132 141anti-parallel
Strand 3
E
179 182anti-parallel
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There are 4 strands in AC5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
156 157first strand
Strand 2
E
147 152anti-parallel
Strand 3
E
193 199anti-parallel
Strand 4
E
202 208anti-parallel
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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
35 37first strand
Strand 2
F
45 47anti-parallel
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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
52 53first strand
Strand 2
F
63 64anti-parallel
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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
72 76first strand
Strand 2
F
85 88anti-parallel
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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
92 95first strand
Strand 2
F
101 104anti-parallel
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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
110 113first strand
Strand 2
F
116 119anti-parallel
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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
124 125first strand
Strand 2
F
134 135anti-parallel
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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
146 148first strand
Strand 2
F
157 158anti-parallel
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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 37first strand
Strand 2
C
45 47anti-parallel
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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 53first strand
Strand 2
C
63 64anti-parallel
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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 76first strand
Strand 2
C
85 88anti-parallel
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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 95first strand
Strand 2
C
101 104anti-parallel
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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 113first strand
Strand 2
C
116 119anti-parallel
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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
124 125first strand
Strand 2
C
134 135anti-parallel
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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
146 148first strand
Strand 2
C
157 158anti-parallel
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