Analysis of interatomic Contacts of Structural Units in PDB entry:
6MI6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MI6 entry

There are 4 chains in PDB entry 6MI6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 353LEU 539
B
 ILE 353LEU 539
C
 ILE 353LEU 539
D
 ILE 353LEU 539
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 6MI6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
358 363Right-handed alpha
Helix 2
AA2
A
364 376Right-handed alpha
Helix 3
AA3
A
393 413Right-handed alpha
Helix 4
AA4
A
417 424Right-handed alpha
Helix 5
AA5
A
455 466Right-handed alpha
Helix 6
AA6
A
470 476Right-handed 310
Helix 7
AA7
A
478 485Right-handed alpha
Helix 8
AA8
A
486 488Right-handed 310
Helix 9
AA9
A
506 517Right-handed alpha
Helix 10
AB1
B
358 363Right-handed alpha
Helix 11
AB2
B
364 376Right-handed alpha
Helix 12
AB3
B
393 413Right-handed alpha
Helix 13
AB4
B
417 424Right-handed alpha
Helix 14
AB5
B
455 466Right-handed alpha
Helix 15
AB6
B
471 475Right-handed 310
Helix 16
AB7
B
478 485Right-handed alpha
Helix 17
AB8
B
486 488Right-handed 310
Helix 18
AB9
B
506 517Right-handed alpha
Helix 19
AC1
C
358 376Right-handed alpha
Helix 20
AC2
C
393 413Right-handed alpha
Helix 21
AC3
C
417 424Right-handed alpha
Helix 22
AC4
C
455 467Right-handed alpha
Helix 23
AC5
C
470 474Right-handed 310
Helix 24
AC6
C
478 485Right-handed alpha
Helix 25
AC7
C
486 488Right-handed 310
Helix 26
AC8
C
506 515Right-handed alpha
Helix 27
AC9
D
358 363Right-handed alpha
Helix 28
AD1
D
364 376Right-handed alpha
Helix 29
AD2
D
393 399Right-handed alpha
Helix 30
AD3
D
399 413Right-handed alpha
Helix 31
AD4
D
417 424Right-handed alpha
Helix 32
AD5
D
455 467Right-handed alpha
Helix 33
AD6
D
471 477Right-handed 310
Helix 34
AD7
D
478 485Right-handed alpha
Helix 35
AD8
D
506 517Right-handed alpha
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There are 8 sheets in PDB entry 6MI6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
355 357first strand
Strand 2
A
390 392anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 385first strand
Strand 2
A
430 439parallel
Strand 3
A
442 449anti-parallel
Strand 4
A
530 538anti-parallel
Strand 5
A
520 526anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
355 357first strand
Strand 2
B
390 392anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 385first strand
Strand 2
B
430 438parallel
Strand 3
B
442 449anti-parallel
Strand 4
B
530 538anti-parallel
Strand 5
B
520 526anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
355 357first strand
Strand 2
C
390 392anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
380 385first strand
Strand 2
C
430 437parallel
Strand 3
C
444 449anti-parallel
Strand 4
C
530 536anti-parallel
Strand 5
C
520 526anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
355 357first strand
Strand 2
D
390 392anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
380 385first strand
Strand 2
D
430 439parallel
Strand 3
D
442 449anti-parallel
Strand 4
D
530 538anti-parallel
Strand 5
D
520 526anti-parallel
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