Analysis of interatomic Contacts of Structural Units in PDB entry:
6MIZ

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MIZ entry

There are 4 chains in PDB entry 6MIZ (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 67	TYR 1503
B	ILE 67	TYR 1503
C	ILE 67	TYR 1503
D	ILE 67	TYR 1503

There are216 helices in PDB entry 6MIZ. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	152	160	Right-handed alpha
Helix 2	AA2	A	183	202	Right-handed alpha
Helix 3	AA3	A	213	227	Right-handed alpha
Helix 4	AA4	A	298	303	Right-handed alpha
Helix 5	AA5	A	304	311	Right-handed alpha
Helix 6	AA6	A	336	347	Right-handed alpha
Helix 7	AA7	A	361	367	Right-handed alpha
Helix 8	AA8	A	398	412	Right-handed alpha
Helix 9	AA9	A	428	433	Right-handed alpha
Helix 10	AB1	A	434	441	Right-handed alpha
Helix 11	AB2	A	442	444	Right-handed 310
Helix 12	AB3	A	458	463	Right-handed 310
Helix 13	AB4	A	464	472	Right-handed alpha
Helix 14	AB5	A	480	494	Right-handed alpha
Helix 15	AB6	A	496	506	Right-handed alpha
Helix 16	AB7	A	509	514	Right-handed alpha
Helix 17	AB8	A	515	524	Right-handed alpha
Helix 18	AB9	A	530	543	Right-handed alpha
Helix 19	AC1	A	558	569	Right-handed alpha
Helix 20	AC2	A	621	632	Right-handed alpha
Helix 21	AC3	A	634	643	Right-handed alpha
Helix 22	AC4	A	650	666	Right-handed alpha
Helix 23	AC5	A	671	696	Right-handed alpha
Helix 24	AC6	A	697	705	Right-handed alpha
Helix 25	AC7	A	719	724	Right-handed alpha
Helix 26	AC8	A	733	743	Right-handed alpha
Helix 27	AC9	A	755	760	Right-handed alpha
Helix 28	AD1	A	762	766	Right-handed 310
Helix 29	AD2	A	773	778	Right-handed alpha
Helix 30	AD3	A	783	793	Right-handed alpha
Helix 31	AD4	A	794	819	Right-handed alpha
Helix 32	AD5	A	828	833	Right-handed 310
Helix 33	AD6	A	839	848	Right-handed alpha
Helix 34	AD7	A	859	865	Right-handed alpha
Helix 35	AD8	A	866	888	Right-handed alpha
Helix 36	AD9	A	889	892	Right-handed 310
Helix 37	AE1	A	893	903	Right-handed alpha
Helix 38	AE2	A	903	914	Right-handed alpha
Helix 39	AE3	A	920	928	Right-handed alpha
Helix 40	AE4	A	930	950	Right-handed alpha
Helix 41	AE5	A	971	980	Right-handed alpha
Helix 42	AE6	A	983	988	Right-handed alpha
Helix 43	AE7	A	1022	1037	Right-handed alpha
Helix 44	AE8	A	1038	1055	Right-handed alpha
Helix 45	AE9	A	1055	1066	Right-handed alpha
Helix 46	AF1	A	1067	1074	Right-handed alpha
Helix 47	AF2	A	1084	1094	Right-handed alpha
Helix 48	AF3	A	1114	1142	Right-handed alpha
Helix 49	AF4	A	1143	1160	Right-handed alpha
Helix 50	AF5	A	1161	1163	Right-handed 310
Helix 51	AF6	A	1397	1405	Right-handed 310
Helix 52	AF7	A	1417	1421	Right-handed 310
Helix 53	AF8	A	1487	1490	Right-handed 310
Helix 54	AF9	A	1491	1500	Right-handed alpha
Helix 55	AG1	B	152	160	Right-handed alpha
Helix 56	AG2	B	183	202	Right-handed alpha
Helix 57	AG3	B	213	227	Right-handed alpha
Helix 58	AG4	B	298	303	Right-handed alpha
Helix 59	AG5	B	304	311	Right-handed alpha
Helix 60	AG6	B	336	347	Right-handed alpha
Helix 61	AG7	B	361	367	Right-handed alpha
Helix 62	AG8	B	398	412	Right-handed alpha
Helix 63	AG9	B	428	433	Right-handed alpha
Helix 64	AH1	B	434	441	Right-handed alpha
Helix 65	AH2	B	442	444	Right-handed 310
Helix 66	AH3	B	458	463	Right-handed 310
Helix 67	AH4	B	464	472	Right-handed alpha
Helix 68	AH5	B	480	494	Right-handed alpha
Helix 69	AH6	B	496	506	Right-handed alpha
Helix 70	AH7	B	509	514	Right-handed alpha
Helix 71	AH8	B	515	524	Right-handed alpha
Helix 72	AH9	B	530	543	Right-handed alpha
Helix 73	AI1	B	558	569	Right-handed alpha
Helix 74	AI2	B	621	632	Right-handed alpha
Helix 75	AI3	B	634	643	Right-handed alpha
Helix 76	AI4	B	650	666	Right-handed alpha
Helix 77	AI5	B	671	696	Right-handed alpha
Helix 78	AI6	B	697	705	Right-handed alpha
Helix 79	AI7	B	719	724	Right-handed alpha
Helix 80	AI8	B	733	743	Right-handed alpha
Helix 81	AI9	B	755	760	Right-handed alpha
Helix 82	AJ1	B	762	766	Right-handed 310
Helix 83	AJ2	B	773	778	Right-handed alpha
Helix 84	AJ3	B	783	793	Right-handed alpha
Helix 85	AJ4	B	794	819	Right-handed alpha
Helix 86	AJ5	B	828	833	Right-handed 310
Helix 87	AJ6	B	839	848	Right-handed alpha
Helix 88	AJ7	B	859	865	Right-handed alpha
Helix 89	AJ8	B	866	888	Right-handed alpha
Helix 90	AJ9	B	889	892	Right-handed 310
Helix 91	AK1	B	893	903	Right-handed alpha
Helix 92	AK2	B	903	914	Right-handed alpha
Helix 93	AK3	B	920	928	Right-handed alpha
Helix 94	AK4	B	930	950	Right-handed alpha
Helix 95	AK5	B	971	980	Right-handed alpha
Helix 96	AK6	B	983	988	Right-handed alpha
Helix 97	AK7	B	1022	1037	Right-handed alpha
Helix 98	AK8	B	1038	1055	Right-handed alpha
Helix 99	AK9	B	1055	1066	Right-handed alpha
Helix 100	AL1	B	1067	1074	Right-handed alpha
Helix 101	AL2	B	1084	1094	Right-handed alpha
Helix 102	AL3	B	1114	1142	Right-handed alpha
Helix 103	AL4	B	1143	1160	Right-handed alpha
Helix 104	AL5	B	1161	1163	Right-handed 310
Helix 105	AL6	B	1397	1405	Right-handed 310
Helix 106	AL7	B	1417	1421	Right-handed 310
Helix 107	AL8	B	1487	1490	Right-handed 310
Helix 108	AL9	B	1491	1500	Right-handed alpha
Helix 109	AM1	C	152	160	Right-handed alpha
Helix 110	AM2	C	183	202	Right-handed alpha
Helix 111	AM3	C	213	227	Right-handed alpha
Helix 112	AM4	C	298	303	Right-handed alpha
Helix 113	AM5	C	304	311	Right-handed alpha
Helix 114	AM6	C	336	347	Right-handed alpha
Helix 115	AM7	C	361	367	Right-handed alpha
Helix 116	AM8	C	398	412	Right-handed alpha
Helix 117	AM9	C	428	433	Right-handed alpha
Helix 118	AN1	C	434	441	Right-handed alpha
Helix 119	AN2	C	442	444	Right-handed 310
Helix 120	AN3	C	458	463	Right-handed 310
Helix 121	AN4	C	464	472	Right-handed alpha
Helix 122	AN5	C	480	494	Right-handed alpha
Helix 123	AN6	C	496	506	Right-handed alpha
Helix 124	AN7	C	509	514	Right-handed alpha
Helix 125	AN8	C	515	524	Right-handed alpha
Helix 126	AN9	C	530	543	Right-handed alpha
Helix 127	AO1	C	558	569	Right-handed alpha
Helix 128	AO2	C	621	632	Right-handed alpha
Helix 129	AO3	C	634	643	Right-handed alpha
Helix 130	AO4	C	650	666	Right-handed alpha
Helix 131	AO5	C	671	696	Right-handed alpha
Helix 132	AO6	C	697	705	Right-handed alpha
Helix 133	AO7	C	719	724	Right-handed alpha
Helix 134	AO8	C	733	743	Right-handed alpha
Helix 135	AO9	C	755	760	Right-handed alpha
Helix 136	AP1	C	762	766	Right-handed 310
Helix 137	AP2	C	773	778	Right-handed alpha
Helix 138	AP3	C	783	793	Right-handed alpha
Helix 139	AP4	C	794	819	Right-handed alpha
Helix 140	AP5	C	828	833	Right-handed 310
Helix 141	AP6	C	839	848	Right-handed alpha
Helix 142	AP7	C	859	865	Right-handed alpha
Helix 143	AP8	C	866	888	Right-handed alpha
Helix 144	AP9	C	889	892	Right-handed 310
Helix 145	AQ1	C	893	903	Right-handed alpha
Helix 146	AQ2	C	903	914	Right-handed alpha
Helix 147	AQ3	C	920	928	Right-handed alpha
Helix 148	AQ4	C	930	950	Right-handed alpha
Helix 149	AQ5	C	971	980	Right-handed alpha
Helix 150	AQ6	C	983	988	Right-handed alpha
Helix 151	AQ7	C	1022	1037	Right-handed alpha
Helix 152	AQ8	C	1038	1055	Right-handed alpha
Helix 153	AQ9	C	1055	1066	Right-handed alpha
Helix 154	AR1	C	1067	1074	Right-handed alpha
Helix 155	AR2	C	1084	1094	Right-handed alpha
Helix 156	AR3	C	1114	1142	Right-handed alpha
Helix 157	AR4	C	1143	1160	Right-handed alpha
Helix 158	AR5	C	1161	1163	Right-handed 310
Helix 159	AR6	C	1397	1405	Right-handed 310
Helix 160	AR7	C	1417	1421	Right-handed 310
Helix 161	AR8	C	1487	1490	Right-handed 310
Helix 162	AR9	C	1491	1500	Right-handed alpha
Helix 163	AS1	D	152	160	Right-handed alpha
Helix 164	AS2	D	183	202	Right-handed alpha
Helix 165	AS3	D	213	227	Right-handed alpha
Helix 166	AS4	D	298	303	Right-handed alpha
Helix 167	AS5	D	304	311	Right-handed alpha
Helix 168	AS6	D	336	347	Right-handed alpha
Helix 169	AS7	D	361	367	Right-handed alpha
Helix 170	AS8	D	398	412	Right-handed alpha
Helix 171	AS9	D	428	433	Right-handed alpha
Helix 172	AT1	D	434	441	Right-handed alpha
Helix 173	AT2	D	442	444	Right-handed 310
Helix 174	AT3	D	458	463	Right-handed 310
Helix 175	AT4	D	464	472	Right-handed alpha
Helix 176	AT5	D	480	494	Right-handed alpha
Helix 177	AT6	D	496	506	Right-handed alpha
Helix 178	AT7	D	509	514	Right-handed alpha
Helix 179	AT8	D	515	524	Right-handed alpha
Helix 180	AT9	D	530	543	Right-handed alpha
Helix 181	AU1	D	558	569	Right-handed alpha
Helix 182	AU2	D	621	632	Right-handed alpha
Helix 183	AU3	D	634	643	Right-handed alpha
Helix 184	AU4	D	650	666	Right-handed alpha
Helix 185	AU5	D	671	696	Right-handed alpha
Helix 186	AU6	D	697	705	Right-handed alpha
Helix 187	AU7	D	719	724	Right-handed alpha
Helix 188	AU8	D	733	743	Right-handed alpha
Helix 189	AU9	D	755	760	Right-handed alpha
Helix 190	AV1	D	762	766	Right-handed 310
Helix 191	AV2	D	773	778	Right-handed alpha
Helix 192	AV3	D	783	793	Right-handed alpha
Helix 193	AV4	D	794	819	Right-handed alpha
Helix 194	AV5	D	828	833	Right-handed 310
Helix 195	AV6	D	839	848	Right-handed alpha
Helix 196	AV7	D	859	865	Right-handed alpha
Helix 197	AV8	D	866	888	Right-handed alpha
Helix 198	AV9	D	889	892	Right-handed 310
Helix 199	AW1	D	893	903	Right-handed alpha
Helix 200	AW2	D	903	914	Right-handed alpha
Helix 201	AW3	D	920	928	Right-handed alpha
Helix 202	AW4	D	930	950	Right-handed alpha
Helix 203	AW5	D	971	980	Right-handed alpha
Helix 204	AW6	D	983	988	Right-handed alpha
Helix 205	AW7	D	1022	1037	Right-handed alpha
Helix 206	AW8	D	1038	1055	Right-handed alpha
Helix 207	AW9	D	1055	1066	Right-handed alpha
Helix 208	AX1	D	1067	1074	Right-handed alpha
Helix 209	AX2	D	1084	1094	Right-handed alpha
Helix 210	AX3	D	1114	1142	Right-handed alpha
Helix 211	AX4	D	1143	1160	Right-handed alpha
Helix 212	AX5	D	1161	1163	Right-handed 310
Helix 213	AX6	D	1397	1405	Right-handed 310
Helix 214	AX7	D	1417	1421	Right-handed 310
Helix 215	AX8	D	1487	1490	Right-handed 310
Helix 216	AX9	D	1491	1500	Right-handed alpha

There are 20 sheets in PDB entry 6MIZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	264	first strand
Strand 2	A	127	132	parallel
Strand 3	A	141	145	anti-parallel
Strand 4	A	283	288	parallel
Strand 5	A	237	244	parallel
Strand 6	A	204	206	parallel
Strand 7	A	170	174	parallel
Strand 8	A	325	329	parallel
Strand 9	A	350	353	parallel
Strand 10	A	416	419	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1318	1319	first strand
Strand 2	A	1324	1325	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1354	1355	first strand
Strand 2	A	1372	1375	anti-parallel
Strand 3	A	1475	1477	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1377	1378	first strand
Strand 2	A	1385	1386	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1422	1429	first strand
Strand 2	A	1440	1446	anti-parallel

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There are 10 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	264	first strand
Strand 2	B	127	132	parallel
Strand 3	B	141	145	anti-parallel
Strand 4	B	283	288	parallel
Strand 5	B	237	244	parallel
Strand 6	B	204	206	parallel
Strand 7	B	170	174	parallel
Strand 8	B	325	329	parallel
Strand 9	B	350	353	parallel
Strand 10	B	416	419	parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1318	1319	first strand
Strand 2	B	1324	1325	anti-parallel

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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1354	1355	first strand
Strand 2	B	1372	1375	anti-parallel
Strand 3	B	1475	1477	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1377	1378	first strand
Strand 2	B	1385	1386	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1422	1429	first strand
Strand 2	B	1440	1446	anti-parallel

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There are 10 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	264	first strand
Strand 2	C	127	132	parallel
Strand 3	C	141	145	anti-parallel
Strand 4	C	283	288	parallel
Strand 5	C	237	244	parallel
Strand 6	C	204	206	parallel
Strand 7	C	170	174	parallel
Strand 8	C	325	329	parallel
Strand 9	C	350	353	parallel
Strand 10	C	416	419	parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1318	1319	first strand
Strand 2	C	1324	1325	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1354	1355	first strand
Strand 2	C	1372	1375	anti-parallel
Strand 3	C	1475	1477	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1377	1378	first strand
Strand 2	C	1385	1386	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1422	1429	first strand
Strand 2	C	1440	1446	anti-parallel

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There are 10 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	264	first strand
Strand 2	D	127	132	parallel
Strand 3	D	141	145	anti-parallel
Strand 4	D	283	288	parallel
Strand 5	D	237	244	parallel
Strand 6	D	204	206	parallel
Strand 7	D	170	174	parallel
Strand 8	D	325	329	parallel
Strand 9	D	350	353	parallel
Strand 10	D	416	419	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1318	1319	first strand
Strand 2	D	1324	1325	anti-parallel

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There are 3 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1354	1355	first strand
Strand 2	D	1372	1375	anti-parallel
Strand 3	D	1475	1477	anti-parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1377	1378	first strand
Strand 2	D	1385	1386	anti-parallel

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There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1422	1429	first strand
Strand 2	D	1440	1446	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MIZ

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MIZ