Analysis of interatomic Contacts of Structural Units in PDB entry:
6MJ2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MJ2 entry

There are 4 chains in PDB entry 6MJ2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 67	TYR 1503
B	ILE 67	TYR 1503
C	ILE 67	TYR 1503
D	ILE 67	TYR 1503

There are224 helices in PDB entry 6MJ2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	152	160	Right-handed alpha
Helix 2	AA2	A	183	201	Right-handed alpha
Helix 3	AA3	A	213	228	Right-handed alpha
Helix 4	AA4	A	298	312	Right-handed alpha
Helix 5	AA5	A	335	346	Right-handed alpha
Helix 6	AA6	A	358	365	Right-handed alpha
Helix 7	AA7	A	376	380	Right-handed 310
Helix 8	AA8	A	391	395	Right-handed 310
Helix 9	AA9	A	401	412	Right-handed alpha
Helix 10	AB1	A	413	416	Right-handed 310
Helix 11	AB2	A	420	425	Right-handed alpha
Helix 12	AB3	A	426	428	Right-handed 310
Helix 13	AB4	A	435	440	Right-handed alpha
Helix 14	AB5	A	449	460	Right-handed alpha
Helix 15	AB6	A	461	463	Right-handed 310
Helix 16	AB7	A	464	471	Right-handed alpha
Helix 17	AB8	A	481	483	Right-handed 310
Helix 18	AB9	A	484	493	Right-handed alpha
Helix 19	AC1	A	496	506	Right-handed alpha
Helix 20	AC2	A	509	514	Right-handed alpha
Helix 21	AC3	A	515	523	Right-handed alpha
Helix 22	AC4	A	530	543	Right-handed alpha
Helix 23	AC5	A	557	568	Right-handed alpha
Helix 24	AC6	A	594	598	Right-handed 310
Helix 25	AC7	A	620	631	Right-handed alpha
Helix 26	AC8	A	634	644	Right-handed alpha
Helix 27	AC9	A	649	666	Right-handed alpha
Helix 28	AD1	A	671	696	Right-handed alpha
Helix 29	AD2	A	697	704	Right-handed alpha
Helix 30	AD3	A	733	743	Right-handed alpha
Helix 31	AD4	A	752	757	Right-handed alpha
Helix 32	AD5	A	757	762	Right-handed alpha
Helix 33	AD6	A	773	778	Right-handed alpha
Helix 34	AD7	A	783	793	Right-handed alpha
Helix 35	AD8	A	796	819	Right-handed alpha
Helix 36	AD9	A	826	832	Right-handed alpha
Helix 37	AE1	A	832	850	Right-handed alpha
Helix 38	AE2	A	856	864	Right-handed alpha
Helix 39	AE3	A	866	888	Right-handed alpha
Helix 40	AE4	A	891	915	Right-handed alpha
Helix 41	AE5	A	920	930	Right-handed alpha
Helix 42	AE6	A	930	945	Right-handed alpha
Helix 43	AE7	A	945	953	Right-handed alpha
Helix 44	AE8	A	964	970	Right-handed alpha
Helix 45	AE9	A	983	988	Right-handed alpha
Helix 46	AF1	A	1022	1038	Right-handed alpha
Helix 47	AF2	A	1042	1049	Right-handed alpha
Helix 48	AF3	A	1058	1076	Right-handed alpha
Helix 49	AF4	A	1084	1091	Right-handed alpha
Helix 50	AF5	A	1114	1142	Right-handed alpha
Helix 51	AF6	A	1143	1160	Right-handed alpha
Helix 52	AF7	A	1161	1165	Right-handed 310
Helix 53	AF8	A	1397	1404	Right-handed 310
Helix 54	AF9	A	1405	1410	Right-handed alpha
Helix 55	AG1	A	1489	1491	Right-handed 310
Helix 56	AG2	A	1492	1497	Right-handed alpha
Helix 57	AG3	B	152	160	Right-handed alpha
Helix 58	AG4	B	183	201	Right-handed alpha
Helix 59	AG5	B	213	228	Right-handed alpha
Helix 60	AG6	B	298	312	Right-handed alpha
Helix 61	AG7	B	335	346	Right-handed alpha
Helix 62	AG8	B	358	365	Right-handed alpha
Helix 63	AG9	B	376	380	Right-handed 310
Helix 64	AH1	B	391	395	Right-handed 310
Helix 65	AH2	B	401	412	Right-handed alpha
Helix 66	AH3	B	413	416	Right-handed 310
Helix 67	AH4	B	420	425	Right-handed alpha
Helix 68	AH5	B	426	428	Right-handed 310
Helix 69	AH6	B	435	440	Right-handed alpha
Helix 70	AH7	B	449	460	Right-handed alpha
Helix 71	AH8	B	461	463	Right-handed 310
Helix 72	AH9	B	464	471	Right-handed alpha
Helix 73	AI1	B	481	483	Right-handed 310
Helix 74	AI2	B	484	493	Right-handed alpha
Helix 75	AI3	B	496	506	Right-handed alpha
Helix 76	AI4	B	509	514	Right-handed alpha
Helix 77	AI5	B	515	523	Right-handed alpha
Helix 78	AI6	B	530	543	Right-handed alpha
Helix 79	AI7	B	557	568	Right-handed alpha
Helix 80	AI8	B	594	598	Right-handed 310
Helix 81	AI9	B	620	631	Right-handed alpha
Helix 82	AJ1	B	634	644	Right-handed alpha
Helix 83	AJ2	B	649	666	Right-handed alpha
Helix 84	AJ3	B	671	696	Right-handed alpha
Helix 85	AJ4	B	697	704	Right-handed alpha
Helix 86	AJ5	B	733	743	Right-handed alpha
Helix 87	AJ6	B	752	757	Right-handed alpha
Helix 88	AJ7	B	757	762	Right-handed alpha
Helix 89	AJ8	B	763	768	Right-handed 310
Helix 90	AJ9	B	773	778	Right-handed alpha
Helix 91	AK1	B	783	793	Right-handed alpha
Helix 92	AK2	B	796	819	Right-handed alpha
Helix 93	AK3	B	832	850	Right-handed alpha
Helix 94	AK4	B	856	864	Right-handed alpha
Helix 95	AK5	B	866	888	Right-handed alpha
Helix 96	AK6	B	891	915	Right-handed alpha
Helix 97	AK7	B	920	930	Right-handed alpha
Helix 98	AK8	B	930	945	Right-handed alpha
Helix 99	AK9	B	945	953	Right-handed alpha
Helix 100	AL1	B	964	970	Right-handed alpha
Helix 101	AL2	B	983	988	Right-handed alpha
Helix 102	AL3	B	1022	1038	Right-handed alpha
Helix 103	AL4	B	1042	1049	Right-handed alpha
Helix 104	AL5	B	1058	1076	Right-handed alpha
Helix 105	AL6	B	1084	1091	Right-handed alpha
Helix 106	AL7	B	1114	1142	Right-handed alpha
Helix 107	AL8	B	1143	1160	Right-handed alpha
Helix 108	AL9	B	1161	1165	Right-handed 310
Helix 109	AM1	B	1397	1404	Right-handed 310
Helix 110	AM2	B	1405	1410	Right-handed alpha
Helix 111	AM3	B	1489	1491	Right-handed 310
Helix 112	AM4	B	1492	1497	Right-handed alpha
Helix 113	AM5	C	152	160	Right-handed alpha
Helix 114	AM6	C	183	201	Right-handed alpha
Helix 115	AM7	C	213	228	Right-handed alpha
Helix 116	AM8	C	298	312	Right-handed alpha
Helix 117	AM9	C	335	346	Right-handed alpha
Helix 118	AN1	C	358	365	Right-handed alpha
Helix 119	AN2	C	376	380	Right-handed 310
Helix 120	AN3	C	391	395	Right-handed 310
Helix 121	AN4	C	401	412	Right-handed alpha
Helix 122	AN5	C	413	416	Right-handed 310
Helix 123	AN6	C	420	425	Right-handed alpha
Helix 124	AN7	C	426	428	Right-handed 310
Helix 125	AN8	C	435	440	Right-handed alpha
Helix 126	AN9	C	449	460	Right-handed alpha
Helix 127	AO1	C	461	463	Right-handed 310
Helix 128	AO2	C	464	471	Right-handed alpha
Helix 129	AO3	C	481	483	Right-handed 310
Helix 130	AO4	C	484	493	Right-handed alpha
Helix 131	AO5	C	496	506	Right-handed alpha
Helix 132	AO6	C	509	514	Right-handed alpha
Helix 133	AO7	C	515	523	Right-handed alpha
Helix 134	AO8	C	530	543	Right-handed alpha
Helix 135	AO9	C	557	568	Right-handed alpha
Helix 136	AP1	C	594	598	Right-handed 310
Helix 137	AP2	C	620	631	Right-handed alpha
Helix 138	AP3	C	634	644	Right-handed alpha
Helix 139	AP4	C	649	666	Right-handed alpha
Helix 140	AP5	C	671	696	Right-handed alpha
Helix 141	AP6	C	697	704	Right-handed alpha
Helix 142	AP7	C	733	743	Right-handed alpha
Helix 143	AP8	C	752	757	Right-handed alpha
Helix 144	AP9	C	757	762	Right-handed alpha
Helix 145	AQ1	C	773	778	Right-handed alpha
Helix 146	AQ2	C	783	793	Right-handed alpha
Helix 147	AQ3	C	796	819	Right-handed alpha
Helix 148	AQ4	C	826	832	Right-handed alpha
Helix 149	AQ5	C	832	850	Right-handed alpha
Helix 150	AQ6	C	856	864	Right-handed alpha
Helix 151	AQ7	C	866	888	Right-handed alpha
Helix 152	AQ8	C	891	915	Right-handed alpha
Helix 153	AQ9	C	920	930	Right-handed alpha
Helix 154	AR1	C	930	945	Right-handed alpha
Helix 155	AR2	C	945	953	Right-handed alpha
Helix 156	AR3	C	964	970	Right-handed alpha
Helix 157	AR4	C	983	988	Right-handed alpha
Helix 158	AR5	C	1022	1038	Right-handed alpha
Helix 159	AR6	C	1042	1049	Right-handed alpha
Helix 160	AR7	C	1058	1076	Right-handed alpha
Helix 161	AR8	C	1084	1091	Right-handed alpha
Helix 162	AR9	C	1114	1142	Right-handed alpha
Helix 163	AS1	C	1143	1160	Right-handed alpha
Helix 164	AS2	C	1161	1165	Right-handed 310
Helix 165	AS3	C	1397	1404	Right-handed 310
Helix 166	AS4	C	1405	1410	Right-handed alpha
Helix 167	AS5	C	1489	1491	Right-handed 310
Helix 168	AS6	C	1492	1497	Right-handed alpha
Helix 169	AS7	D	152	160	Right-handed alpha
Helix 170	AS8	D	183	201	Right-handed alpha
Helix 171	AS9	D	213	228	Right-handed alpha
Helix 172	AT1	D	298	312	Right-handed alpha
Helix 173	AT2	D	335	346	Right-handed alpha
Helix 174	AT3	D	358	365	Right-handed alpha
Helix 175	AT4	D	376	380	Right-handed 310
Helix 176	AT5	D	391	395	Right-handed 310
Helix 177	AT6	D	401	412	Right-handed alpha
Helix 178	AT7	D	413	416	Right-handed 310
Helix 179	AT8	D	420	425	Right-handed alpha
Helix 180	AT9	D	426	428	Right-handed 310
Helix 181	AU1	D	435	440	Right-handed alpha
Helix 182	AU2	D	449	460	Right-handed alpha
Helix 183	AU3	D	461	463	Right-handed 310
Helix 184	AU4	D	464	471	Right-handed alpha
Helix 185	AU5	D	481	483	Right-handed 310
Helix 186	AU6	D	484	493	Right-handed alpha
Helix 187	AU7	D	496	506	Right-handed alpha
Helix 188	AU8	D	509	514	Right-handed alpha
Helix 189	AU9	D	515	523	Right-handed alpha
Helix 190	AV1	D	530	543	Right-handed alpha
Helix 191	AV2	D	557	568	Right-handed alpha
Helix 192	AV3	D	594	598	Right-handed 310
Helix 193	AV4	D	620	631	Right-handed alpha
Helix 194	AV5	D	634	644	Right-handed alpha
Helix 195	AV6	D	649	666	Right-handed alpha
Helix 196	AV7	D	671	696	Right-handed alpha
Helix 197	AV8	D	697	704	Right-handed alpha
Helix 198	AV9	D	733	743	Right-handed alpha
Helix 199	AW1	D	752	757	Right-handed alpha
Helix 200	AW2	D	757	762	Right-handed alpha
Helix 201	AW3	D	773	778	Right-handed alpha
Helix 202	AW4	D	783	793	Right-handed alpha
Helix 203	AW5	D	796	819	Right-handed alpha
Helix 204	AW6	D	826	832	Right-handed alpha
Helix 205	AW7	D	832	850	Right-handed alpha
Helix 206	AW8	D	856	864	Right-handed alpha
Helix 207	AW9	D	866	888	Right-handed alpha
Helix 208	AX1	D	891	915	Right-handed alpha
Helix 209	AX2	D	920	930	Right-handed alpha
Helix 210	AX3	D	930	945	Right-handed alpha
Helix 211	AX4	D	945	953	Right-handed alpha
Helix 212	AX5	D	964	970	Right-handed alpha
Helix 213	AX6	D	983	988	Right-handed alpha
Helix 214	AX7	D	1022	1038	Right-handed alpha
Helix 215	AX8	D	1042	1049	Right-handed alpha
Helix 216	AX9	D	1058	1076	Right-handed alpha
Helix 217	AY1	D	1084	1091	Right-handed alpha
Helix 218	AY2	D	1114	1142	Right-handed alpha
Helix 219	AY3	D	1143	1160	Right-handed alpha
Helix 220	AY4	D	1161	1165	Right-handed 310
Helix 221	AY5	D	1397	1404	Right-handed 310
Helix 222	AY6	D	1405	1410	Right-handed alpha
Helix 223	AY7	D	1489	1491	Right-handed 310
Helix 224	AY8	D	1492	1497	Right-handed alpha

There are 16 sheets in PDB entry 6MJ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	261	262	first strand
Strand 2	A	127	130	parallel
Strand 3	A	141	143	anti-parallel
Strand 4	A	283	288	parallel
Strand 5	A	237	244	parallel
Strand 6	A	204	207	parallel
Strand 7	A	170	173	parallel
Strand 8	A	326	329	parallel
Strand 9	A	350	352	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1318	1319	first strand
Strand 2	A	1324	1325	anti-parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1422	1428	first strand
Strand 2	A	1441	1449	anti-parallel
Strand 3	A	1348	1355	parallel
Strand 4	A	1372	1375	anti-parallel
Strand 5	A	1475	1476	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1377	1378	first strand
Strand 2	A	1385	1386	anti-parallel

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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	261	262	first strand
Strand 2	B	127	130	parallel
Strand 3	B	141	143	anti-parallel
Strand 4	B	283	288	parallel
Strand 5	B	237	244	parallel
Strand 6	B	204	207	parallel
Strand 7	B	170	173	parallel
Strand 8	B	326	329	parallel
Strand 9	B	350	352	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1318	1319	first strand
Strand 2	B	1324	1325	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1422	1428	first strand
Strand 2	B	1441	1449	anti-parallel
Strand 3	B	1348	1355	parallel
Strand 4	B	1372	1375	anti-parallel
Strand 5	B	1475	1476	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1377	1378	first strand
Strand 2	B	1385	1386	anti-parallel

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There are 9 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	261	262	first strand
Strand 2	C	127	130	parallel
Strand 3	C	141	143	anti-parallel
Strand 4	C	283	288	parallel
Strand 5	C	237	244	parallel
Strand 6	C	204	207	parallel
Strand 7	C	170	173	parallel
Strand 8	C	326	329	parallel
Strand 9	C	350	352	parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1318	1319	first strand
Strand 2	C	1324	1325	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1422	1428	first strand
Strand 2	C	1441	1449	anti-parallel
Strand 3	C	1348	1355	parallel
Strand 4	C	1372	1375	anti-parallel
Strand 5	C	1475	1476	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1377	1378	first strand
Strand 2	C	1385	1386	anti-parallel

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There are 9 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	261	262	first strand
Strand 2	D	127	130	parallel
Strand 3	D	141	143	anti-parallel
Strand 4	D	283	288	parallel
Strand 5	D	237	244	parallel
Strand 6	D	204	207	parallel
Strand 7	D	170	173	parallel
Strand 8	D	326	329	parallel
Strand 9	D	350	352	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1318	1319	first strand
Strand 2	D	1324	1325	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1422	1428	first strand
Strand 2	D	1441	1449	anti-parallel
Strand 3	D	1348	1355	parallel
Strand 4	D	1372	1375	anti-parallel
Strand 5	D	1475	1476	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	1377	1378	first strand
Strand 2	D	1385	1386	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MJ2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MJ2