Analysis of interatomic Contacts of Structural Units in PDB entry:
6MJG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MJG entry

There are 3 chains in PDB entry 6MJG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9ALA 385
A
 SER 420SER 420
A
 VAL 422ALA 425
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 6MJG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
25 35Right-handed alpha
Helix 2
AA2
A
44 55Right-handed alpha
Helix 3
AA3
A
62 65Right-handed 310
Helix 4
AA4
A
70 88Right-handed alpha
Helix 5
AA5
A
104 117Right-handed alpha
Helix 6
AA6
A
128 137Right-handed alpha
Helix 7
AA7
A
151 157Right-handed alpha
Helix 8
AA8
A
171 175Right-handed 310
Helix 9
AA9
A
189 202Right-handed alpha
Helix 10
AB1
A
228 231Right-handed 310
Helix 11
AB2
A
232 237Right-handed alpha
Helix 12
AB3
A
256 264Right-handed alpha
Helix 13
AB4
A
295 308Right-handed alpha
Helix 14
AB5
A
320 333Right-handed alpha
Helix 15
AB6
A
333 343Right-handed alpha
Helix 16
AB7
A
343 351Right-handed alpha
Helix 17
AB8
A
355 365Right-handed alpha
Helix 18
AB9
A
366 374Right-handed alpha
Helix 19
AC1
A
380 385Right-handed alpha
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There are 2 sheets in PDB entry 6MJG. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
58 60first strand
Strand 2
A
37 41parallel
Strand 3
A
91 96parallel
Strand 4
A
10 15parallel
Strand 5
A
120 123parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
146 150first strand
Strand 2
A
166 170parallel
Strand 3
A
244 247anti-parallel
Strand 4
A
206 211anti-parallel
Strand 5
A
221 226anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il