Analysis of interatomic Contacts of Structural Units in PDB entry:
6MLQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MLQ entry

There are 3 chains in PDB entry 6MLQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2SER 439
B
 ARG 2ASP 437
C
 GLU 12ASN 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 6MLQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 28Right-handed alpha
Helix 2
AA2
A
71 79Right-handed alpha
Helix 3
AA3
A
88 92Right-handed 310
Helix 4
AA4
A
102 108Right-handed alpha
Helix 5
AA5
A
109 112Right-handed 310
Helix 6
AA6
A
114 129Right-handed alpha
Helix 7
AA7
A
144 161Right-handed alpha
Helix 8
AA8
A
182 191Right-handed alpha
Helix 9
AA9
A
205 216Right-handed alpha
Helix 10
AB1
A
223 239Right-handed alpha
Helix 11
AB2
A
239 244Right-handed alpha
Helix 12
AB3
A
287 294Right-handed alpha
Helix 13
AB4
A
295 296Right-handed 310
Helix 14
AB5
A
297 301Right-handed 310
Helix 15
AB6
A
324 337Right-handed alpha
Helix 16
AB7
A
383 401Right-handed alpha
Helix 17
AB8
A
404 411Right-handed alpha
Helix 18
AB9
A
414 435Right-handed alpha
Helix 19
AC1
B
10 29Right-handed alpha
Helix 20
AC2
B
71 80Right-handed alpha
Helix 21
AC3
B
88 90Right-handed 310
Helix 22
AC4
B
102 108Right-handed alpha
Helix 23
AC5
B
114 127Right-handed alpha
Helix 24
AC6
B
147 161Right-handed alpha
Helix 25
AC7
B
184 193Right-handed alpha
Helix 26
AC8
B
206 215Right-handed alpha
Helix 27
AC9
B
223 237Right-handed alpha
Helix 28
AD1
B
251 260Right-handed alpha
Helix 29
AD2
B
287 296Right-handed alpha
Helix 30
AD3
B
325 339Right-handed alpha
Helix 31
AD4
B
340 343Right-handed 310
Helix 32
AD5
B
384 398Right-handed alpha
Helix 33
AD6
B
408 412Right-handed 310
Helix 34
AD7
B
414 436Right-handed alpha
Helix 35
AD8
C
66 83Right-handed alpha
Helix 36
AD9
C
99 105Right-handed alpha
Helix 37
AE1
C
118 132Right-handed alpha
Helix 38
AE2
C
188 202Right-handed alpha
Helix 39
AE3
C
213 217Right-handed 310
Helix 40
AE4
C
269 289Right-handed alpha
Helix 41
AE5
C
293 297Right-handed 310
Helix 42
AE6
C
300 303Right-handed 310
Helix 43
AE7
C
304 310Right-handed alpha
Helix 44
AE8
C
329 331Right-handed 310
Helix 45
AE9
C
332 347Right-handed alpha
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There are 11 sheets in PDB entry 6MLQ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 94first strand
Strand 2
A
65 69parallel
Strand 3
A
6 8parallel
Strand 4
A
134 140parallel
Strand 5
A
165 171parallel
Strand 6
A
200 204parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
374 381anti-parallel
Strand 3
A
312 314anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
374 381anti-parallel
Strand 3
A
317 320anti-parallel
Strand 4
A
353 356parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 8first strand
Strand 2
B
132 138parallel
Strand 3
B
165 172parallel
Strand 4
B
200 205parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 55first strand
Strand 2
B
61 63anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
92 94parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 272first strand
Strand 2
B
374 381anti-parallel
Strand 3
B
312 320anti-parallel
Strand 4
B
351 356parallel
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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
17 22parallel
Strand 3
C
319 326parallel
Strand 4
C
88 94parallel
Strand 5
C
246 252parallel
Strand 6
C
218 225anti-parallel
Strand 7
C
141 149anti-parallel
Strand 8
C
152 155anti-parallel
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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
17 22parallel
Strand 3
C
319 326parallel
Strand 4
C
88 94parallel
Strand 5
C
246 252parallel
Strand 6
C
218 225anti-parallel
Strand 7
C
141 149anti-parallel
Strand 8
C
184 185anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
40 41first strand
Strand 2
C
46 49anti-parallel
Strand 3
C
53 54anti-parallel
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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
168 170first strand
Strand 2
C
176 178anti-parallel
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