Analysis of interatomic Contacts of Structural Units in PDB entry:
6MLR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MLR entry

There are 3 chains in PDB entry 6MLR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 2SER 439
B
 ARG 2ASP 437
C
 GLU 12ASN 348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 6MLR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 28Right-handed alpha
Helix 2
AA2
A
71 79Right-handed alpha
Helix 3
AA3
A
102 108Right-handed alpha
Helix 4
AA4
A
108 129Right-handed alpha
Helix 5
AA5
A
144 162Right-handed alpha
Helix 6
AA6
A
182 192Right-handed alpha
Helix 7
AA7
A
194 198Right-handed 310
Helix 8
AA8
A
205 216Right-handed alpha
Helix 9
AA9
A
223 237Right-handed alpha
Helix 10
AB1
A
252 259Right-handed alpha
Helix 11
AB2
A
287 295Right-handed alpha
Helix 12
AB3
A
296 301Right-handed 310
Helix 13
AB4
A
324 337Right-handed alpha
Helix 14
AB5
A
383 400Right-handed alpha
Helix 15
AB6
A
404 410Right-handed alpha
Helix 16
AB7
A
414 435Right-handed alpha
Helix 17
AB8
B
9 29Right-handed alpha
Helix 18
AB9
B
40 44Right-handed 310
Helix 19
AC1
B
48 51Right-handed 310
Helix 20
AC2
B
72 80Right-handed alpha
Helix 21
AC3
B
88 90Right-handed 310
Helix 22
AC4
B
104 109Right-handed alpha
Helix 23
AC5
B
110 113Right-handed 310
Helix 24
AC6
B
114 127Right-handed alpha
Helix 25
AC7
B
147 161Right-handed alpha
Helix 26
AC8
B
184 193Right-handed alpha
Helix 27
AC9
B
206 215Right-handed alpha
Helix 28
AD1
B
223 243Right-handed alpha
Helix 29
AD2
B
251 259Right-handed alpha
Helix 30
AD3
B
287 296Right-handed alpha
Helix 31
AD4
B
306 310Right-handed 310
Helix 32
AD5
B
325 339Right-handed alpha
Helix 33
AD6
B
340 343Right-handed 310
Helix 34
AD7
B
384 396Right-handed alpha
Helix 35
AD8
B
405 410Right-handed alpha
Helix 36
AD9
B
415 437Right-handed alpha
Helix 37
AE1
C
26 31Right-handed alpha
Helix 38
AE2
C
66 74Right-handed alpha
Helix 39
AE3
C
74 83Right-handed alpha
Helix 40
AE4
C
99 105Right-handed alpha
Helix 41
AE5
C
118 134Right-handed alpha
Helix 42
AE6
C
188 202Right-handed alpha
Helix 43
AE7
C
266 287Right-handed alpha
Helix 44
AE8
C
300 303Right-handed 310
Helix 45
AE9
C
304 309Right-handed alpha
Helix 46
AF1
C
332 345Right-handed alpha
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There are 8 sheets in PDB entry 6MLR. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 67first strand
Strand 2
A
6 8parallel
Strand 3
A
135 138parallel
Strand 4
A
166 171parallel
Strand 5
A
200 204parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
373 380anti-parallel
Strand 3
A
314 321anti-parallel
Strand 4
A
351 355parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
65 69parallel
Strand 3
B
3 8parallel
Strand 4
B
132 138parallel
Strand 5
B
165 172parallel
Strand 6
B
200 205parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
62 63anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 272first strand
Strand 2
B
374 381anti-parallel
Strand 3
B
312 320anti-parallel
Strand 4
B
351 352parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
17 22parallel
Strand 3
C
319 326parallel
Strand 4
C
88 94parallel
Strand 5
C
243 252parallel
Strand 6
C
218 228anti-parallel
Strand 7
C
142 149anti-parallel
Strand 8
C
152 155anti-parallel
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There are 8 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
59 61first strand
Strand 2
C
17 22parallel
Strand 3
C
319 326parallel
Strand 4
C
88 94parallel
Strand 5
C
243 252parallel
Strand 6
C
218 228anti-parallel
Strand 7
C
142 149anti-parallel
Strand 8
C
184 185anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 39first strand
Strand 2
C
46 49anti-parallel
Strand 3
C
53 56anti-parallel
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