Analysis of interatomic Contacts of Structural Units in PDB entry:
6MLU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MLU entry

There are 2 chains in PDB entry 6MLU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 88PHE 240
B
 ARG 88PHE 240
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 6MLU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
114 125Right-handed alpha
Helix 2
AA2
A
137 142Right-handed alpha
Helix 3
AA3
A
173 184Right-handed alpha
Helix 4
AA4
A
184 190Right-handed alpha
Helix 5
AA5
B
114 125Right-handed alpha
Helix 6
AA6
B
137 142Right-handed alpha
Helix 7
AA7
B
173 184Right-handed alpha
Helix 8
AA8
B
184 190Right-handed alpha
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There are 6 sheets in PDB entry 6MLU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 93first strand
Strand 2
A
231 237anti-parallel
Strand 3
A
127 135anti-parallel
Strand 4
A
196 202anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 167first strand
Strand 2
A
146 154anti-parallel
Strand 3
A
215 217anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 167first strand
Strand 2
A
146 154anti-parallel
Strand 3
A
221 222anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 93first strand
Strand 2
B
231 237anti-parallel
Strand 3
B
127 135anti-parallel
Strand 4
B
196 202anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 167first strand
Strand 2
B
146 154anti-parallel
Strand 3
B
215 217anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 167first strand
Strand 2
B
146 154anti-parallel
Strand 3
B
221 222anti-parallel
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