Analysis of interatomic Contacts of Structural Units in PDB entry:
6MN3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MN3 entry

There are 2 chains in PDB entry 6MN3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ILE 257
B
 GLN -1ILE 257
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6MN3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 18Right-handed alpha
Helix 2
AA2
A
30 35Right-handed alpha
Helix 3
AA3
A
39 53Right-handed alpha
Helix 4
AA4
A
79 82Right-handed 310
Helix 5
AA5
A
83 90Right-handed alpha
Helix 6
AA6
A
110 116Right-handed alpha
Helix 7
AA7
A
128 136Right-handed alpha
Helix 8
AA8
A
146 150Right-handed 310
Helix 9
AA9
A
151 160Right-handed alpha
Helix 10
AB1
A
190 193Right-handed 310
Helix 11
AB2
A
194 203Right-handed alpha
Helix 12
AB3
A
221 235Right-handed alpha
Helix 13
AB4
A
247 256Right-handed alpha
Helix 14
AB5
B
6 18Right-handed alpha
Helix 15
AB6
B
30 35Right-handed alpha
Helix 16
AB7
B
39 53Right-handed alpha
Helix 17
AB8
B
79 82Right-handed 310
Helix 18
AB9
B
83 90Right-handed alpha
Helix 19
AC1
B
110 116Right-handed alpha
Helix 20
AC2
B
128 136Right-handed alpha
Helix 21
AC3
B
146 150Right-handed 310
Helix 22
AC4
B
151 160Right-handed alpha
Helix 23
AC5
B
190 193Right-handed 310
Helix 24
AC6
B
194 203Right-handed alpha
Helix 25
AC7
B
221 235Right-handed alpha
Helix 26
AC8
B
242 246Right-handed 310
Helix 27
AC9
B
247 256Right-handed alpha
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There are 4 sheets in PDB entry 6MN3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 97first strand
Strand 2
A
104 107anti-parallel
Strand 3
A
57 61anti-parallel
Strand 4
A
24 29parallel
Strand 5
A
139 143parallel
Strand 6
A
214 220anti-parallel
Strand 7
A
206 211anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
166 172first strand
Strand 2
A
179 185anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
96 97first strand
Strand 2
B
104 107anti-parallel
Strand 3
B
57 61anti-parallel
Strand 4
B
24 29parallel
Strand 5
B
139 143parallel
Strand 6
B
214 220anti-parallel
Strand 7
B
206 211anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
166 174first strand
Strand 2
B
177 185anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il