Analysis of interatomic Contacts of Structural Units in PDB entry:
6MN5

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MN5 entry

There are 6 chains in PDB entry 6MN5 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLN -1	ILE 257
B	GLN -1	ILE 257
C	GLN -1	ILE 257
D	GLN -1	GLY 258
E	GLN -1	ILE 257
F	GLN -1	LEU 14

There are 83 helices in PDB entry 6MN5. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	6	18	Right-handed alpha
Helix 2	AA2	A	30	35	Right-handed alpha
Helix 3	AA3	A	39	53	Right-handed alpha
Helix 4	AA4	A	79	82	Right-handed 310
Helix 5	AA5	A	83	90	Right-handed alpha
Helix 6	AA6	A	111	116	Right-handed alpha
Helix 7	AA7	A	128	136	Right-handed alpha
Helix 8	AA8	A	146	149	Right-handed 310
Helix 9	AA9	A	150	160	Right-handed alpha
Helix 10	AB1	A	190	194	Right-handed 310
Helix 11	AB2	A	195	203	Right-handed alpha
Helix 12	AB3	A	221	233	Right-handed alpha
Helix 13	AB4	A	242	246	Right-handed 310
Helix 14	AB5	A	247	257	Right-handed alpha
Helix 15	AB6	B	6	18	Right-handed alpha
Helix 16	AB7	B	30	35	Right-handed alpha
Helix 17	AB8	B	39	53	Right-handed alpha
Helix 18	AB9	B	79	81	Right-handed 310
Helix 19	AC1	B	82	90	Right-handed alpha
Helix 20	AC2	B	110	116	Right-handed alpha
Helix 21	AC3	B	128	136	Right-handed alpha
Helix 22	AC4	B	146	149	Right-handed 310
Helix 23	AC5	B	150	160	Right-handed alpha
Helix 24	AC6	B	190	193	Right-handed 310
Helix 25	AC7	B	194	202	Right-handed alpha
Helix 26	AC8	B	221	235	Right-handed alpha
Helix 27	AC9	B	242	246	Right-handed 310
Helix 28	AD1	B	247	257	Right-handed alpha
Helix 29	AD2	C	6	18	Right-handed alpha
Helix 30	AD3	C	30	35	Right-handed alpha
Helix 31	AD4	C	39	53	Right-handed alpha
Helix 32	AD5	C	79	82	Right-handed 310
Helix 33	AD6	C	83	90	Right-handed alpha
Helix 34	AD7	C	110	116	Right-handed alpha
Helix 35	AD8	C	128	136	Right-handed alpha
Helix 36	AD9	C	146	150	Right-handed 310
Helix 37	AE1	C	151	160	Right-handed alpha
Helix 38	AE2	C	190	193	Right-handed 310
Helix 39	AE3	C	194	203	Right-handed alpha
Helix 40	AE4	C	221	235	Right-handed alpha
Helix 41	AE5	C	242	246	Right-handed 310
Helix 42	AE6	C	247	256	Right-handed alpha
Helix 43	AE7	D	6	18	Right-handed alpha
Helix 44	AE8	D	30	35	Right-handed alpha
Helix 45	AE9	D	39	53	Right-handed alpha
Helix 46	AF1	D	79	82	Right-handed 310
Helix 47	AF2	D	83	90	Right-handed alpha
Helix 48	AF3	D	110	116	Right-handed alpha
Helix 49	AF4	D	128	136	Right-handed alpha
Helix 50	AF5	D	146	149	Right-handed 310
Helix 51	AF6	D	150	160	Right-handed alpha
Helix 52	AF7	D	190	193	Right-handed 310
Helix 53	AF8	D	194	203	Right-handed alpha
Helix 54	AF9	D	221	235	Right-handed alpha
Helix 55	AG1	D	242	246	Right-handed 310
Helix 56	AG2	D	247	255	Right-handed alpha
Helix 57	AG3	E	6	18	Right-handed alpha
Helix 58	AG4	E	30	35	Right-handed alpha
Helix 59	AG5	E	39	53	Right-handed alpha
Helix 60	AG6	E	79	81	Right-handed 310
Helix 61	AG7	E	82	90	Right-handed alpha
Helix 62	AG8	E	110	116	Right-handed alpha
Helix 63	AG9	E	128	136	Right-handed alpha
Helix 64	AH1	E	146	150	Right-handed 310
Helix 65	AH2	E	151	160	Right-handed alpha
Helix 66	AH3	E	190	193	Right-handed 310
Helix 67	AH4	E	194	203	Right-handed alpha
Helix 68	AH5	E	221	235	Right-handed alpha
Helix 69	AH6	E	247	252	Right-handed alpha
Helix 70	AH7	E	253	257	Right-handed 310
Helix 71	AH8	F	6	18	Right-handed alpha
Helix 72	AH9	F	30	35	Right-handed alpha
Helix 73	AI1	F	39	53	Right-handed alpha
Helix 74	AI2	F	79	82	Right-handed 310
Helix 75	AI3	F	83	90	Right-handed alpha
Helix 76	AI4	F	110	116	Right-handed alpha
Helix 77	AI5	F	128	136	Right-handed alpha
Helix 78	AI6	F	151	160	Right-handed alpha
Helix 79	AI7	F	190	194	Right-handed 310
Helix 80	AI8	F	195	201	Right-handed alpha
Helix 81	AI9	F	222	233	Right-handed alpha
Helix 82	AJ1	F	242	246	Right-handed 310
Helix 83	AJ2	F	249	256	Right-handed alpha

There are 12 sheets in PDB entry 6MN5. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	96	97	first strand
Strand 2	A	104	107	anti-parallel
Strand 3	A	57	61	anti-parallel
Strand 4	A	24	29	parallel
Strand 5	A	139	143	parallel
Strand 6	A	214	220	anti-parallel
Strand 7	A	206	211	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	174	first strand
Strand 2	A	177	185	anti-parallel

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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	96	97	first strand
Strand 2	B	104	107	anti-parallel
Strand 3	B	57	61	anti-parallel
Strand 4	B	24	29	parallel
Strand 5	B	139	143	parallel
Strand 6	B	214	220	anti-parallel
Strand 7	B	206	211	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	166	174	first strand
Strand 2	B	177	185	anti-parallel

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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	96	97	first strand
Strand 2	C	104	107	anti-parallel
Strand 3	C	57	61	anti-parallel
Strand 4	C	24	29	parallel
Strand 5	C	139	143	parallel
Strand 6	C	214	220	anti-parallel
Strand 7	C	206	211	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	174	first strand
Strand 2	C	177	185	anti-parallel

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There are 7 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	96	97	first strand
Strand 2	D	104	107	anti-parallel
Strand 3	D	57	61	anti-parallel
Strand 4	D	24	29	parallel
Strand 5	D	139	143	parallel
Strand 6	D	214	220	anti-parallel
Strand 7	D	206	211	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	166	173	first strand
Strand 2	D	178	185	anti-parallel

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There are 7 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	96	97	first strand
Strand 2	E	104	107	anti-parallel
Strand 3	E	57	61	anti-parallel
Strand 4	E	24	29	parallel
Strand 5	E	139	143	parallel
Strand 6	E	214	220	anti-parallel
Strand 7	E	207	211	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	166	174	first strand
Strand 2	E	177	185	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	96	97	first strand
Strand 2	F	104	107	anti-parallel
Strand 3	F	57	61	anti-parallel
Strand 4	F	24	29	parallel
Strand 5	F	139	143	parallel
Strand 6	F	214	220	anti-parallel
Strand 7	F	206	211	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	166	174	first strand
Strand 2	F	177	185	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MN5

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MN5