Analysis of interatomic Contacts of Structural Units in PDB entry:
6MN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MN6 entry

There are 2 chains in PDB entry 6MN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 311LEU 658
B
 TYR 301LEU 658
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 6MN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
313 317Right-handed 310
Helix 2
AA2
A
322 324Right-handed 310
Helix 3
AA3
A
334 345Right-handed alpha
Helix 4
AA4
A
366 369Right-handed 310
Helix 5
AA5
A
378 387Right-handed alpha
Helix 6
AA6
A
398 409Right-handed alpha
Helix 7
AA7
A
437 448Right-handed alpha
Helix 8
AA8
A
493 508Right-handed alpha
Helix 9
AA9
A
517 526Right-handed alpha
Helix 10
AB1
A
543 545Right-handed 310
Helix 11
AB2
A
586 590Right-handed 310
Helix 12
AB3
A
643 656Right-handed alpha
Helix 13
AB4
B
313 318Right-handed alpha
Helix 14
AB5
B
322 324Right-handed 310
Helix 15
AB6
B
334 345Right-handed alpha
Helix 16
AB7
B
366 369Right-handed 310
Helix 17
AB8
B
372 376Right-handed 310
Helix 18
AB9
B
378 384Right-handed alpha
Helix 19
AC1
B
398 408Right-handed alpha
Helix 20
AC2
B
437 449Right-handed alpha
Helix 21
AC3
B
493 508Right-handed alpha
Helix 22
AC4
B
517 526Right-handed alpha
Helix 23
AC5
B
543 545Right-handed 310
Helix 24
AC6
B
586 590Right-handed 310
Helix 25
AC7
B
643 658Right-handed alpha
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There are 8 sheets in PDB entry 6MN6. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
319 320first strand
Strand 2
A
429 436anti-parallel
Strand 3
A
413 419anti-parallel
Strand 4
A
392 394parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
327 328first strand
Strand 2
A
348 352parallel
Strand 3
A
359 364anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
531 534first strand
Strand 2
A
636 642anti-parallel
Strand 3
A
557 563anti-parallel
Strand 4
A
584 585anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
547 549first strand
Strand 2
A
628 632anti-parallel
Strand 3
A
566 570anti-parallel
Strand 4
A
575 579anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
319 320first strand
Strand 2
B
428 436anti-parallel
Strand 3
B
413 420anti-parallel
Strand 4
B
392 394parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
327 328first strand
Strand 2
B
348 352parallel
Strand 3
B
359 364anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
531 534first strand
Strand 2
B
636 642anti-parallel
Strand 3
B
557 563anti-parallel
Strand 4
B
584 585anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
547 549first strand
Strand 2
B
628 632anti-parallel
Strand 3
B
566 570anti-parallel
Strand 4
B
575 579anti-parallel
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