Analysis of interatomic Contacts of Structural Units in PDB entry:
6MNC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MNC entry

There are 2 chains in PDB entry 6MNC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1PHE 284
B
 ALA 1PHE 284
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 28 helices in PDB entry 6MNC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 24Right-handed alpha
Helix 2
AA2
A
38 41Right-handed 310
Helix 3
AA3
A
42 50Right-handed alpha
Helix 4
AA4
A
68 78Right-handed alpha
Helix 5
AA5
A
98 102Right-handed 310
Helix 6
AA6
A
103 115Right-handed alpha
Helix 7
AA7
A
115 133Right-handed alpha
Helix 8
AA8
A
144 146Right-handed 310
Helix 9
AA9
A
152 174Right-handed alpha
Helix 10
AB1
A
200 206Right-handed alpha
Helix 11
AB2
A
208 228Right-handed alpha
Helix 12
AB3
A
232 246Right-handed alpha
Helix 13
AB4
A
259 268Right-handed alpha
Helix 14
AB5
A
272 284Right-handed alpha
Helix 15
AB6
B
12 24Right-handed alpha
Helix 16
AB7
B
38 41Right-handed 310
Helix 17
AB8
B
42 51Right-handed alpha
Helix 18
AB9
B
68 78Right-handed alpha
Helix 19
AC1
B
98 102Right-handed 310
Helix 20
AC2
B
103 115Right-handed alpha
Helix 21
AC3
B
115 133Right-handed alpha
Helix 22
AC4
B
142 146Right-handed 310
Helix 23
AC5
B
152 174Right-handed alpha
Helix 24
AC6
B
200 206Right-handed alpha
Helix 25
AC7
B
208 230Right-handed alpha
Helix 26
AC8
B
232 246Right-handed alpha
Helix 27
AC9
B
259 269Right-handed alpha
Helix 28
AD1
B
272 284Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 6MNC. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 63first strand
Strand 2
A
30 36parallel
Strand 3
A
3 7parallel
Strand 4
A
86 89parallel
Strand 5
A
135 142parallel
Strand 6
A
178 185parallel
Strand 7
A
252 254parallel
Back to list of sheets
Back to top of page

There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
59 63first strand
Strand 2
B
30 36parallel
Strand 3
B
3 7parallel
Strand 4
B
86 89parallel
Strand 5
B
135 140parallel
Strand 6
B
178 184parallel
Strand 7
B
252 254parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il