Analysis of interatomic Contacts of Structural Units in PDB entry:
6MNU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MNU entry

There are 4 chains in PDB entry 6MNU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	CYS 3	GLN 293
B	CYS 3	GLN 294
C	CYS 3	ASP 296
D	CYS 3	LEU 295

There are 58 helices in PDB entry 6MNU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	14	18	Right-handed 310
Helix 2	AA2	A	19	23	Right-handed 310
Helix 3	AA3	A	25	28	Right-handed 310
Helix 4	AA4	A	36	47	Right-handed alpha
Helix 5	AA5	A	60	68	Right-handed alpha
Helix 6	AA6	A	70	80	Right-handed alpha
Helix 7	AA7	A	82	91	Right-handed alpha
Helix 8	AA8	A	109	116	Right-handed alpha
Helix 9	AA9	A	117	122	Right-handed alpha
Helix 10	AB1	A	146	158	Right-handed alpha
Helix 11	AB2	A	168	174	Right-handed 310
Helix 12	AB3	A	220	227	Right-handed alpha
Helix 13	AB4	A	237	247	Right-handed alpha
Helix 14	AB5	A	265	279	Right-handed alpha
Helix 15	AB6	A	283	293	Right-handed alpha
Helix 16	AB7	B	14	18	Right-handed 310
Helix 17	AB8	B	19	23	Right-handed 310
Helix 18	AB9	B	25	28	Right-handed 310
Helix 19	AC1	B	36	47	Right-handed alpha
Helix 20	AC2	B	60	68	Right-handed alpha
Helix 21	AC3	B	70	79	Right-handed alpha
Helix 22	AC4	B	82	91	Right-handed alpha
Helix 23	AC5	B	108	117	Right-handed alpha
Helix 24	AC6	B	117	122	Right-handed alpha
Helix 25	AC7	B	146	158	Right-handed alpha
Helix 26	AC8	B	168	172	Right-handed 310
Helix 27	AC9	B	220	227	Right-handed alpha
Helix 28	AD1	B	237	247	Right-handed alpha
Helix 29	AD2	B	265	279	Right-handed alpha
Helix 30	AD3	B	283	294	Right-handed alpha
Helix 31	AD4	C	14	18	Right-handed 310
Helix 32	AD5	C	25	28	Right-handed 310
Helix 33	AD6	C	36	47	Right-handed alpha
Helix 34	AD7	C	60	68	Right-handed alpha
Helix 35	AD8	C	70	80	Right-handed alpha
Helix 36	AD9	C	82	91	Right-handed alpha
Helix 37	AE1	C	108	117	Right-handed alpha
Helix 38	AE2	C	117	122	Right-handed alpha
Helix 39	AE3	C	146	158	Right-handed alpha
Helix 40	AE4	C	168	174	Right-handed 310
Helix 41	AE5	C	220	227	Right-handed alpha
Helix 42	AE6	C	237	249	Right-handed alpha
Helix 43	AE7	C	265	279	Right-handed alpha
Helix 44	AE8	C	283	294	Right-handed alpha
Helix 45	AE9	D	14	18	Right-handed 310
Helix 46	AF1	D	25	28	Right-handed 310
Helix 47	AF2	D	36	47	Right-handed alpha
Helix 48	AF3	D	60	68	Right-handed alpha
Helix 49	AF4	D	70	80	Right-handed alpha
Helix 50	AF5	D	82	90	Right-handed alpha
Helix 51	AF6	D	109	117	Right-handed alpha
Helix 52	AF7	D	117	122	Right-handed alpha
Helix 53	AF8	D	146	158	Right-handed alpha
Helix 54	AF9	D	168	174	Right-handed 310
Helix 55	AG1	D	220	227	Right-handed alpha
Helix 56	AG2	D	237	247	Right-handed alpha
Helix 57	AG3	D	265	279	Right-handed alpha
Helix 58	AG4	D	283	293	Right-handed alpha

There are 15 sheets in PDB entry 6MNU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6,

There are 16 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	190	193	first strand
Strand 2	A	251	255	anti-parallel
Strand 3	A	160	166	parallel
Strand 4	A	209	217	anti-parallel
Strand 5	A	126	129	anti-parallel
Strand 6	A	6	9	parallel
Strand 7	A	51	56	parallel
Strand 8	A	98	103	parallel
Strand 9	D	98	103	anti-parallel
Strand 10	D	51	56	parallel
Strand 11	D	6	9	parallel
Strand 12	D	126	129	parallel
Strand 13	D	209	217	anti-parallel
Strand 14	D	160	166	anti-parallel
Strand 15	D	251	255	parallel
Strand 16	D	190	192	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	30	31	first strand
Strand 2	A	34	35	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	135	first strand
Strand 2	A	260	262	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	176	179	first strand
Strand 2	A	195	198	anti-parallel

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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	98	103	first strand
Strand 2	B	51	56	parallel
Strand 3	B	6	9	parallel
Strand 4	B	126	129	parallel
Strand 5	B	209	217	anti-parallel
Strand 6	B	160	166	anti-parallel
Strand 7	B	251	255	parallel
Strand 8	B	190	193	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	30	31	first strand
Strand 2	B	34	35	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	135	first strand
Strand 2	B	260	262	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	176	179	first strand
Strand 2	B	195	198	anti-parallel

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There are 8 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	98	103	first strand
Strand 2	C	51	56	parallel
Strand 3	C	6	9	parallel
Strand 4	C	126	129	parallel
Strand 5	C	209	217	anti-parallel
Strand 6	C	160	166	anti-parallel
Strand 7	C	251	255	parallel
Strand 8	C	190	193	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	30	31	first strand
Strand 2	C	34	35	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	133	135	first strand
Strand 2	C	260	262	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	176	179	first strand
Strand 2	C	195	198	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	30	31	first strand
Strand 2	D	34	35	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	133	135	first strand
Strand 2	D	260	262	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	176	179	first strand
Strand 2	D	195	198	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MNU

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MNU