Analysis of interatomic Contacts of Structural Units in PDB entry:
6MNY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MNY entry

There are 2 chains in PDB entry 6MNY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 395ASP 656
B
 TRP 395ASP 656
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 6MNY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
438 450Right-handed alpha
Helix 2
AA2
A
482 488Right-handed alpha
Helix 3
AA3
A
489 492Right-handed 310
Helix 4
AA4
A
494 515Right-handed alpha
Helix 5
AA5
A
523 525Right-handed 310
Helix 6
AA6
A
541 545Right-handed 310
Helix 7
AA7
A
560 564Right-handed 310
Helix 8
AA8
A
565 572Right-handed alpha
Helix 9
AA9
A
575 592Right-handed alpha
Helix 10
AB1
A
602 613Right-handed alpha
Helix 11
AB2
A
623 632Right-handed alpha
Helix 12
AB3
A
633 635Right-handed 310
Helix 13
AB4
A
637 641Right-handed 310
Helix 14
AB5
A
643 656Right-handed alpha
Helix 15
AB6
B
398 402Right-handed 310
Helix 16
AB7
B
438 450Right-handed alpha
Helix 17
AB8
B
482 488Right-handed alpha
Helix 18
AB9
B
489 492Right-handed 310
Helix 19
AC1
B
494 515Right-handed alpha
Helix 20
AC2
B
541 545Right-handed 310
Helix 21
AC3
B
560 564Right-handed 310
Helix 22
AC4
B
565 572Right-handed alpha
Helix 23
AC5
B
575 592Right-handed alpha
Helix 24
AC6
B
602 613Right-handed alpha
Helix 25
AC7
B
623 632Right-handed alpha
Helix 26
AC8
B
637 641Right-handed 310
Helix 27
AC9
B
643 656Right-handed alpha
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There are 4 sheets in PDB entry 6MNY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 411first strand
Strand 2
A
414 421anti-parallel
Strand 3
A
425 431anti-parallel
Strand 4
A
471 475anti-parallel
Strand 5
A
460 464anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
480 481first strand
Strand 2
A
527 529anti-parallel
Strand 3
A
535 537anti-parallel
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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
406 411first strand
Strand 2
B
414 421anti-parallel
Strand 3
B
425 432anti-parallel
Strand 4
B
471 475anti-parallel
Strand 5
B
460 464anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
480 481first strand
Strand 2
B
527 529anti-parallel
Strand 3
B
535 537anti-parallel
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