Analysis of interatomic Contacts of Structural Units in PDB entry:
6MNZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MNZ entry

There are 2 chains in PDB entry 6MNZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4ASP 368
B
 SER 4SER 346
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 6MNZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
5 16Right-handed alpha
Helix 2
AA2
A
38 40Right-handed 310
Helix 3
AA3
A
41 52Right-handed alpha
Helix 4
AA4
A
61 69Right-handed alpha
Helix 5
AA5
A
100 113Right-handed alpha
Helix 6
AA6
A
117 121Right-handed 310
Helix 7
AA7
A
135 139Right-handed 310
Helix 8
AA8
A
142 154Right-handed alpha
Helix 9
AA9
A
174 185Right-handed alpha
Helix 10
AB1
A
192 203Right-handed alpha
Helix 11
AB2
A
242 246Right-handed 310
Helix 12
AB3
A
265 270Right-handed alpha
Helix 13
AB4
A
319 337Right-handed alpha
Helix 14
AB5
B
5 15Right-handed alpha
Helix 15
AB6
B
38 40Right-handed 310
Helix 16
AB7
B
41 52Right-handed alpha
Helix 17
AB8
B
61 69Right-handed alpha
Helix 18
AB9
B
100 113Right-handed alpha
Helix 19
AC1
B
117 121Right-handed 310
Helix 20
AC2
B
135 139Right-handed 310
Helix 21
AC3
B
142 154Right-handed alpha
Helix 22
AC4
B
174 185Right-handed alpha
Helix 23
AC5
B
192 203Right-handed alpha
Helix 24
AC6
B
242 245Right-handed 310
Helix 25
AC7
B
265 270Right-handed alpha
Helix 26
AC8
B
319 337Right-handed alpha
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There are 5 sheets in PDB entry 6MNZ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 91first strand
Strand 2
A
122 131anti-parallel
Strand 3
A
57 60parallel
Strand 4
A
160 164anti-parallel
Strand 5
A
31 36anti-parallel
Strand 6
A
19 22anti-parallel
Strand 7
A
188 191parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 215first strand
Strand 2
A
220 228anti-parallel
Strand 3
A
235 239anti-parallel
Strand 4
A
290 292anti-parallel
Strand 5
A
248 253parallel
Strand 6
A
342 344parallel
Strand 7
A
362 365parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
90 91first strand
Strand 2
B
122 131anti-parallel
Strand 3
B
57 60parallel
Strand 4
B
160 164anti-parallel
Strand 5
B
31 36anti-parallel
Strand 6
B
18 22anti-parallel
Strand 7
B
189 191parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 215first strand
Strand 2
B
220 228anti-parallel
Strand 3
B
234 239anti-parallel
Strand 4
B
290 292anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
247 250first strand
Strand 2
B
341 344parallel
Strand 3
B
362 365parallel
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