Analysis of interatomic Contacts of Structural Units in PDB entry:
6MOF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MOF entry

There are 2 chains in PDB entry 6MOF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2GLU 162
B
 ASP 8LEU 224
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 6MOF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 15Right-handed alpha
Helix 2
AA2
A
17 27Right-handed alpha
Helix 3
AA3
A
40 49Right-handed alpha
Helix 4
AA4
A
50 60Right-handed alpha
Helix 5
AA5
A
73 82Right-handed alpha
Helix 6
AA6
A
83 93Right-handed alpha
Helix 7
AA7
A
106 114Right-handed alpha
Helix 8
AA8
A
116 126Right-handed alpha
Helix 9
AA9
A
139 148Right-handed alpha
Helix 10
AB1
A
149 161Right-handed alpha
Helix 11
AB2
B
9 22Right-handed alpha
Helix 12
AB3
B
49 51Right-handed 310
Helix 13
AB4
B
86 90Right-handed 310
Helix 14
AB5
B
114 118Right-handed 310
Helix 15
AB6
B
150 152Right-handed 310
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There are 4 sheets in PDB entry 6MOF. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
37 42anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
69 74anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
53 58anti-parallel
Strand 3
B
96 102anti-parallel
Strand 4
B
107 113anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 131first strand
Strand 2
B
138 143anti-parallel
Strand 3
B
180 183anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 174first strand
Strand 2
B
154 161anti-parallel
Strand 3
B
191 200anti-parallel
Strand 4
B
216 219anti-parallel
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