Analysis of interatomic Contacts of Structural Units in PDB entry:
6MOH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MOH entry

There are 4 chains in PDB entry 6MOH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 9GLN 163
B
 SER 9GLN 163
C
 ALA 7SER 217
D
 ALA 7SER 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 30 helices in PDB entry 6MOH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
9 21Right-handed alpha
Helix 2
AA2
A
23 33Right-handed alpha
Helix 3
AA3
A
46 55Right-handed alpha
Helix 4
AA4
A
56 66Right-handed alpha
Helix 5
AA5
A
79 88Right-handed alpha
Helix 6
AA6
A
89 100Right-handed alpha
Helix 7
AA7
A
112 120Right-handed alpha
Helix 8
AA8
A
122 133Right-handed alpha
Helix 9
AA9
A
145 154Right-handed alpha
Helix 10
AB1
A
155 162Right-handed alpha
Helix 11
AB2
B
10 22Right-handed alpha
Helix 12
AB3
B
23 33Right-handed alpha
Helix 13
AB4
B
46 55Right-handed alpha
Helix 14
AB5
B
56 66Right-handed alpha
Helix 15
AB6
B
79 88Right-handed alpha
Helix 16
AB7
B
89 100Right-handed alpha
Helix 17
AB8
B
112 121Right-handed alpha
Helix 18
AB9
B
122 133Right-handed alpha
Helix 19
AC1
B
145 154Right-handed alpha
Helix 20
AC2
B
155 162Right-handed alpha
Helix 21
AC3
C
8 22Right-handed alpha
Helix 22
AC4
C
49 51Right-handed 310
Helix 23
AC5
C
86 90Right-handed 310
Helix 24
AC6
C
116 118Right-handed 310
Helix 25
AC7
C
150 152Right-handed 310
Helix 26
AC8
D
8 22Right-handed alpha
Helix 27
AC9
D
49 51Right-handed 310
Helix 28
AD1
D
86 90Right-handed 310
Helix 29
AD2
D
116 118Right-handed 310
Helix 30
AD3
D
150 152Right-handed 310
Back to top of page

There are 10 sheets in PDB entry 6MOH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 29first strand
Strand 2
C
36 42anti-parallel
Strand 3
C
79 85anti-parallel
Strand 4
C
70 73anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 67first strand
Strand 2
C
53 59anti-parallel
Strand 3
C
95 102anti-parallel
Strand 4
C
107 114anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
119 120first strand
Strand 2
C
207 208parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 131first strand
Strand 2
C
138 143anti-parallel
Strand 3
C
180 183anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
170 174first strand
Strand 2
C
154 161anti-parallel
Strand 3
C
193 200anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
27 29first strand
Strand 2
D
36 42anti-parallel
Strand 3
D
79 85anti-parallel
Strand 4
D
70 73anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 67first strand
Strand 2
D
53 59anti-parallel
Strand 3
D
95 102anti-parallel
Strand 4
D
107 114anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
119 120first strand
Strand 2
D
207 208parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
125 131first strand
Strand 2
D
138 143anti-parallel
Strand 3
D
180 183anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
170 174first strand
Strand 2
D
154 161anti-parallel
Strand 3
D
191 200anti-parallel
Strand 4
D
216 219anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il