Analysis of interatomic Contacts of Structural Units in PDB entry:
6MOL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MOL entry

There are 3 chains in PDB entry 6MOL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 3GLU 454
B
 ASP 8ASP 223
C
 LYS 10SER 222
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 6MOL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 15Right-handed alpha
Helix 2
AA2
A
16 27Right-handed alpha
Helix 3
AA3
A
39 48Right-handed alpha
Helix 4
AA4
A
49 59Right-handed alpha
Helix 5
AA5
A
72 81Right-handed alpha
Helix 6
AA6
A
82 92Right-handed alpha
Helix 7
AA7
A
105 114Right-handed alpha
Helix 8
AA8
A
115 126Right-handed alpha
Helix 9
AA9
A
138 147Right-handed alpha
Helix 10
AB1
A
148 159Right-handed alpha
Helix 11
AB2
A
171 180Right-handed alpha
Helix 12
AB3
A
181 192Right-handed alpha
Helix 13
AB4
A
204 213Right-handed alpha
Helix 14
AB5
A
214 224Right-handed alpha
Helix 15
AB6
A
237 246Right-handed alpha
Helix 16
AB7
A
247 258Right-handed alpha
Helix 17
AB8
A
270 279Right-handed alpha
Helix 18
AB9
A
280 291Right-handed alpha
Helix 19
AC1
A
299 308Right-handed alpha
Helix 20
AC2
A
309 319Right-handed alpha
Helix 21
AC3
A
332 341Right-handed alpha
Helix 22
AC4
A
342 352Right-handed alpha
Helix 23
AC5
A
365 374Right-handed alpha
Helix 24
AC6
A
375 385Right-handed alpha
Helix 25
AC7
A
398 407Right-handed alpha
Helix 26
AC8
A
408 418Right-handed alpha
Helix 27
AC9
A
431 440Right-handed alpha
Helix 28
AD1
A
441 454Right-handed alpha
Helix 29
AD2
B
9 22Right-handed alpha
Helix 30
AD3
B
116 118Right-handed 310
Helix 31
AD4
B
150 152Right-handed 310
Helix 32
AD5
C
11 22Right-handed alpha
Helix 33
AD6
C
116 118Right-handed 310
Helix 34
AD7
C
150 152Right-handed 310
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There are 8 sheets in PDB entry 6MOL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 29first strand
Strand 2
B
37 43anti-parallel
Strand 3
B
78 84anti-parallel
Strand 4
B
70 74anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 67first strand
Strand 2
B
53 58anti-parallel
Strand 3
B
95 102anti-parallel
Strand 4
B
107 114anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 131first strand
Strand 2
B
138 143anti-parallel
Strand 3
B
180 183anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
170 174first strand
Strand 2
B
154 162anti-parallel
Strand 3
B
191 200anti-parallel
Strand 4
B
216 219anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 29first strand
Strand 2
C
37 42anti-parallel
Strand 3
C
78 84anti-parallel
Strand 4
C
70 74anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 67first strand
Strand 2
C
53 58anti-parallel
Strand 3
C
95 102anti-parallel
Strand 4
C
107 114anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
125 131first strand
Strand 2
C
138 143anti-parallel
Strand 3
C
180 182anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
170 174first strand
Strand 2
C
154 162anti-parallel
Strand 3
C
191 200anti-parallel
Strand 4
C
216 219anti-parallel
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