Analysis of interatomic Contacts of Structural Units in PDB entry:
6MOT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MOT entry

There is 1 chain in PDB entry 6MOT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 25THR 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 6MOT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
194 205Right-handed alpha
Helix 2
AA2
A
241 249Right-handed alpha
Helix 3
AA3
A
249 258Right-handed alpha
Helix 4
AA4
A
263 265Right-handed 310
Helix 5
AA5
A
273 285Right-handed alpha
Helix 6
AA6
A
303 307Right-handed 310
Helix 7
AA7
A
309 314Right-handed alpha
Helix 8
AA8
A
317 325Right-handed alpha
Helix 9
AA9
A
338 352Right-handed alpha
Helix 10
AB1
A
366 378Right-handed alpha
Helix 11
AB2
A
379 381Right-handed 310
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There are 4 sheets in PDB entry 6MOT. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 32first strand
Strand 2
A
44 46anti-parallel
Strand 3
A
51 56anti-parallel
Strand 4
A
78 82anti-parallel
Strand 5
A
72 73anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 70first strand
Strand 2
A
63 65anti-parallel
Strand 3
A
96 98anti-parallel
Strand 4
A
101 103anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
90 94first strand
Strand 2
A
116 123anti-parallel
Strand 3
A
111 113anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 148first strand
Strand 2
A
153 161anti-parallel
Strand 3
A
212 215anti-parallel
Strand 4
A
175 179parallel
Strand 5
A
267 272parallel
Strand 6
A
292 296parallel
Strand 7
A
327 333parallel
Strand 8
A
356 360parallel
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