Analysis of interatomic Contacts of Structural Units in PDB entry:
6MPB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MPB entry

There are 3 chains in PDB entry 6MPB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ASP 43ARG 488
C
 ASP 43ARG 488
A
 ASP 43ARG 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 69 helices in PDB entry 6MPB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
44 52Right-handed alpha
Helix 2
AA2
B
52 75Right-handed alpha
Helix 3
AA3
B
77 81Right-handed 310
Helix 4
AA4
B
82 100Right-handed alpha
Helix 5
AA5
B
104 116Right-handed alpha
Helix 6
AA6
B
120 151Right-handed alpha
Helix 7
AA7
B
159 163Right-handed 310
Helix 8
AA8
B
164 169Right-handed alpha
Helix 9
AA9
B
179 191Right-handed alpha
Helix 10
AB1
B
197 201Right-handed 310
Helix 11
AB2
B
230 248Right-handed alpha
Helix 12
AB3
B
251 292Right-handed alpha
Helix 13
AB4
B
297 316Right-handed alpha
Helix 14
AB5
B
319 330Right-handed alpha
Helix 15
AB6
B
332 339Right-handed alpha
Helix 16
AB7
B
341 351Right-handed alpha
Helix 17
AB8
B
356 367Right-handed alpha
Helix 18
AB9
B
371 382Right-handed alpha
Helix 19
AC1
B
387 404Right-handed alpha
Helix 20
AC2
B
411 428Right-handed alpha
Helix 21
AC3
B
436 438Right-handed 310
Helix 22
AC4
B
439 446Right-handed alpha
Helix 23
AC5
B
462 488Right-handed alpha
Helix 24
AC6
C
44 52Right-handed alpha
Helix 25
AC7
C
52 75Right-handed alpha
Helix 26
AC8
C
77 81Right-handed 310
Helix 27
AC9
C
82 100Right-handed alpha
Helix 28
AD1
C
104 116Right-handed alpha
Helix 29
AD2
C
120 151Right-handed alpha
Helix 30
AD3
C
159 163Right-handed 310
Helix 31
AD4
C
164 169Right-handed alpha
Helix 32
AD5
C
179 191Right-handed alpha
Helix 33
AD6
C
197 201Right-handed 310
Helix 34
AD7
C
230 248Right-handed alpha
Helix 35
AD8
C
251 292Right-handed alpha
Helix 36
AD9
C
297 316Right-handed alpha
Helix 37
AE1
C
319 330Right-handed alpha
Helix 38
AE2
C
332 339Right-handed alpha
Helix 39
AE3
C
341 351Right-handed alpha
Helix 40
AE4
C
356 367Right-handed alpha
Helix 41
AE5
C
371 382Right-handed alpha
Helix 42
AE6
C
387 404Right-handed alpha
Helix 43
AE7
C
411 428Right-handed alpha
Helix 44
AE8
C
436 438Right-handed 310
Helix 45
AE9
C
439 446Right-handed alpha
Helix 46
AF1
C
462 488Right-handed alpha
Helix 47
AF2
A
44 52Right-handed alpha
Helix 48
AF3
A
52 75Right-handed alpha
Helix 49
AF4
A
77 81Right-handed 310
Helix 50
AF5
A
82 100Right-handed alpha
Helix 51
AF6
A
104 116Right-handed alpha
Helix 52
AF7
A
120 151Right-handed alpha
Helix 53
AF8
A
159 163Right-handed 310
Helix 54
AF9
A
164 169Right-handed alpha
Helix 55
AG1
A
179 191Right-handed alpha
Helix 56
AG2
A
197 201Right-handed 310
Helix 57
AG3
A
230 248Right-handed alpha
Helix 58
AG4
A
251 292Right-handed alpha
Helix 59
AG5
A
297 316Right-handed alpha
Helix 60
AG6
A
319 330Right-handed alpha
Helix 61
AG7
A
332 339Right-handed alpha
Helix 62
AG8
A
341 351Right-handed alpha
Helix 63
AG9
A
356 367Right-handed alpha
Helix 64
AH1
A
371 382Right-handed alpha
Helix 65
AH2
A
387 404Right-handed alpha
Helix 66
AH3
A
411 428Right-handed alpha
Helix 67
AH4
A
436 438Right-handed 310
Helix 68
AH5
A
439 446Right-handed alpha
Helix 69
AH6
A
462 488Right-handed alpha
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There are 3 sheets in PDB entry 6MPB. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
207 209first strand
Strand 2
B
220 222anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
207 209first strand
Strand 2
C
220 222anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
207 209first strand
Strand 2
A
220 222anti-parallel
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