Analysis of interatomic Contacts of Structural Units in PDB entry:
6MQ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MQ3 entry

There are 2 chains in PDB entry 6MQ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 43HIS 1011
B
 ASN 43HIS 1011
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 83 helices in PDB entry 6MQ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
95 99Right-handed 310
Helix 2
AA2
A
105 115Right-handed alpha
Helix 3
AA3
A
125 133Right-handed alpha
Helix 4
AA4
A
157 167Right-handed alpha
Helix 5
AA5
A
168 170Right-handed 310
Helix 6
AA6
A
175 195Right-handed alpha
Helix 7
AA7
A
196 209Right-handed alpha
Helix 8
AA8
A
213 217Right-handed 310
Helix 9
AA9
A
222 227Right-handed alpha
Helix 10
AB1
A
236 249Right-handed alpha
Helix 11
AB2
A
250 252Right-handed 310
Helix 12
AB3
A
263 276Right-handed alpha
Helix 13
AB4
A
294 298Right-handed 310
Helix 14
AB5
A
321 326Right-handed 310
Helix 15
AB6
A
329 339Right-handed alpha
Helix 16
AB7
A
345 353Right-handed alpha
Helix 17
AB8
A
380 386Right-handed alpha
Helix 18
AB9
A
386 405Right-handed alpha
Helix 19
AC1
A
407 424Right-handed alpha
Helix 20
AC2
A
429 441Right-handed alpha
Helix 21
AC3
A
460 471Right-handed alpha
Helix 22
AC4
A
472 475Right-handed 310
Helix 23
AC5
A
484 486Right-handed 310
Helix 24
AC6
A
506 515Right-handed alpha
Helix 25
AC7
A
586 614Right-handed alpha
Helix 26
AC8
A
637 651Right-handed alpha
Helix 27
AC9
A
655 672Right-handed alpha
Helix 28
AD1
A
673 676Right-handed 310
Helix 29
AD2
A
677 691Right-handed alpha
Helix 30
AD3
A
696 704Right-handed alpha
Helix 31
AD4
A
705 707Right-handed 310
Helix 32
AD5
A
708 721Right-handed alpha
Helix 33
AD6
A
734 754Right-handed alpha
Helix 34
AD7
A
759 763Right-handed 310
Helix 35
AD8
A
801 824Right-handed alpha
Helix 36
AD9
A
855 877Right-handed alpha
Helix 37
AE1
A
878 894Right-handed alpha
Helix 38
AE2
A
899 913Right-handed alpha
Helix 39
AE3
A
919 930Right-handed alpha
Helix 40
AE4
A
932 944Right-handed alpha
Helix 41
AE5
A
994 1001Right-handed alpha
Helix 42
AE6
B
95 99Right-handed 310
Helix 43
AE7
B
105 115Right-handed alpha
Helix 44
AE8
B
125 133Right-handed alpha
Helix 45
AE9
B
157 167Right-handed alpha
Helix 46
AF1
B
168 170Right-handed 310
Helix 47
AF2
B
175 195Right-handed alpha
Helix 48
AF3
B
196 209Right-handed alpha
Helix 49
AF4
B
213 217Right-handed 310
Helix 50
AF5
B
222 227Right-handed alpha
Helix 51
AF6
B
227 234Right-handed alpha
Helix 52
AF7
B
236 249Right-handed alpha
Helix 53
AF8
B
250 252Right-handed 310
Helix 54
AF9
B
263 276Right-handed alpha
Helix 55
AG1
B
294 298Right-handed 310
Helix 56
AG2
B
321 326Right-handed 310
Helix 57
AG3
B
329 339Right-handed alpha
Helix 58
AG4
B
345 353Right-handed alpha
Helix 59
AG5
B
380 386Right-handed alpha
Helix 60
AG6
B
386 405Right-handed alpha
Helix 61
AG7
B
407 424Right-handed alpha
Helix 62
AG8
B
429 441Right-handed alpha
Helix 63
AG9
B
460 471Right-handed alpha
Helix 64
AH1
B
472 475Right-handed 310
Helix 65
AH2
B
484 486Right-handed 310
Helix 66
AH3
B
506 515Right-handed alpha
Helix 67
AH4
B
586 614Right-handed alpha
Helix 68
AH5
B
637 651Right-handed alpha
Helix 69
AH6
B
655 672Right-handed alpha
Helix 70
AH7
B
673 676Right-handed 310
Helix 71
AH8
B
677 691Right-handed alpha
Helix 72
AH9
B
696 704Right-handed alpha
Helix 73
AI1
B
705 707Right-handed 310
Helix 74
AI2
B
708 722Right-handed alpha
Helix 75
AI3
B
734 754Right-handed alpha
Helix 76
AI4
B
759 763Right-handed 310
Helix 77
AI5
B
801 824Right-handed alpha
Helix 78
AI6
B
855 877Right-handed alpha
Helix 79
AI7
B
878 894Right-handed alpha
Helix 80
AI8
B
899 913Right-handed alpha
Helix 81
AI9
B
919 930Right-handed alpha
Helix 82
AJ1
B
932 944Right-handed alpha
Helix 83
AJ2
B
994 1001Right-handed alpha
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There are 8 sheets in PDB entry 6MQ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 50first strand
Strand 2
A
63 69anti-parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
254 260parallel
Strand 5
A
85 92anti-parallel
Strand 6
A
147 154anti-parallel
Strand 7
A
137 142anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 364first strand
Strand 2
A
371 378anti-parallel
Strand 3
A
311 319anti-parallel
Strand 4
A
477 482anti-parallel
Strand 5
A
300 305parallel
Strand 6
A
499 504anti-parallel
Strand 7
A
491 492anti-parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
549 553first strand
Strand 2
A
557 563anti-parallel
Strand 3
A
724 731parallel
Strand 4
A
571 579anti-parallel
Strand 5
A
626 634anti-parallel
Strand 6
A
616 622anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
832 840first strand
Strand 2
A
843 852anti-parallel
Strand 3
A
789 796anti-parallel
Strand 4
A
952 959anti-parallel
Strand 5
A
775 782parallel
Strand 6
A
990 992parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
47 50first strand
Strand 2
B
63 69anti-parallel
Strand 3
B
74 79anti-parallel
Strand 4
B
254 260parallel
Strand 5
B
85 92anti-parallel
Strand 6
B
147 154anti-parallel
Strand 7
B
137 142anti-parallel
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There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 364first strand
Strand 2
B
371 378anti-parallel
Strand 3
B
311 319anti-parallel
Strand 4
B
477 482anti-parallel
Strand 5
B
300 304parallel
Strand 6
B
499 504anti-parallel
Strand 7
B
491 492anti-parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
549 553first strand
Strand 2
B
557 563anti-parallel
Strand 3
B
724 731parallel
Strand 4
B
571 579anti-parallel
Strand 5
B
626 634anti-parallel
Strand 6
B
616 622anti-parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
832 840first strand
Strand 2
B
843 852anti-parallel
Strand 3
B
789 799anti-parallel
Strand 4
B
952 959anti-parallel
Strand 5
B
775 782parallel
Strand 6
B
990 991parallel
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