Analysis of interatomic Contacts of Structural Units in PDB entry:
6MQ5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MQ5 entry

There are 2 chains in PDB entry 6MQ5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1GLN 234
B
 MSE 1GLN 234
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 6MQ5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 14Right-handed alpha
Helix 2
AA2
A
16 33Right-handed alpha
Helix 3
AA3
A
43 57Right-handed alpha
Helix 4
AA4
A
63 82Right-handed alpha
Helix 5
AA5
A
85 100Right-handed alpha
Helix 6
AA6
A
104 122Right-handed alpha
Helix 7
AA7
A
124 131Right-handed alpha
Helix 8
AA8
A
132 138Right-handed 310
Helix 9
AA9
A
140 159Right-handed alpha
Helix 10
AB1
A
160 163Right-handed 310
Helix 11
AB2
A
164 177Right-handed alpha
Helix 12
AB3
A
180 199Right-handed alpha
Helix 13
AB4
A
199 208Right-handed alpha
Helix 14
AB5
A
212 229Right-handed alpha
Helix 15
AB6
B
4 14Right-handed alpha
Helix 16
AB7
B
16 33Right-handed alpha
Helix 17
AB8
B
43 57Right-handed alpha
Helix 18
AB9
B
63 82Right-handed alpha
Helix 19
AC1
B
83 87Right-handed 310
Helix 20
AC2
B
88 100Right-handed alpha
Helix 21
AC3
B
104 122Right-handed alpha
Helix 22
AC4
B
124 131Right-handed alpha
Helix 23
AC5
B
132 138Right-handed 310
Helix 24
AC6
B
140 159Right-handed alpha
Helix 25
AC7
B
160 163Right-handed 310
Helix 26
AC8
B
164 176Right-handed alpha
Helix 27
AC9
B
180 199Right-handed alpha
Helix 28
AD1
B
200 208Right-handed alpha
Helix 29
AD2
B
212 230Right-handed alpha
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There are no sheets in PDB entry 6MQ5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il