Analysis of interatomic Contacts of Structural Units in PDB entry:
6MR3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MR3 entry

There are 3 chains in PDB entry 6MR3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 174VAL 418
B
 GLU 174VAL 418
C
 GLU 174HIS 414
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 6MR3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
187 200Right-handed alpha
Helix 2
AA2
A
226 243Right-handed alpha
Helix 3
AA3
A
246 250Right-handed alpha
Helix 4
AA4
A
259 272Right-handed alpha
Helix 5
AA5
A
284 291Right-handed alpha
Helix 6
AA6
A
295 299Right-handed 310
Helix 7
AA7
A
308 317Right-handed alpha
Helix 8
AA8
A
319 327Right-handed alpha
Helix 9
AA9
A
330 346Right-handed alpha
Helix 10
AB1
A
391 413Right-handed alpha
Helix 11
AB2
B
187 195Right-handed alpha
Helix 12
AB3
B
195 202Right-handed alpha
Helix 13
AB4
B
226 243Right-handed alpha
Helix 14
AB5
B
246 250Right-handed alpha
Helix 15
AB6
B
259 272Right-handed alpha
Helix 16
AB7
B
284 291Right-handed alpha
Helix 17
AB8
B
295 299Right-handed 310
Helix 18
AB9
B
308 317Right-handed alpha
Helix 19
AC1
B
319 327Right-handed alpha
Helix 20
AC2
B
330 346Right-handed alpha
Helix 21
AC3
B
391 413Right-handed alpha
Helix 22
AC4
C
188 193Right-handed alpha
Helix 23
AC5
C
226 243Right-handed alpha
Helix 24
AC6
C
246 250Right-handed alpha
Helix 25
AC7
C
259 272Right-handed alpha
Helix 26
AC8
C
284 291Right-handed alpha
Helix 27
AC9
C
295 299Right-handed 310
Helix 28
AD1
C
308 317Right-handed alpha
Helix 29
AD2
C
319 327Right-handed alpha
Helix 30
AD3
C
330 346Right-handed alpha
Helix 31
AD4
C
391 413Right-handed alpha
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There are 6 sheets in PDB entry 6MR3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 212first strand
Strand 2
A
215 224anti-parallel
Strand 3
A
175 183anti-parallel
Strand 4
A
251 254anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
304 305first strand
Strand 2
A
275 279parallel
Strand 3
A
349 355parallel
Strand 4
A
369 375anti-parallel
Strand 5
A
380 386anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
206 212first strand
Strand 2
B
215 224anti-parallel
Strand 3
B
175 183anti-parallel
Strand 4
B
251 254anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
304 305first strand
Strand 2
B
275 279parallel
Strand 3
B
349 355parallel
Strand 4
B
369 375anti-parallel
Strand 5
B
380 386anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
206 211first strand
Strand 2
C
215 224anti-parallel
Strand 3
C
175 184anti-parallel
Strand 4
C
251 254anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
304 305first strand
Strand 2
C
275 279parallel
Strand 3
C
349 355parallel
Strand 4
C
369 375anti-parallel
Strand 5
C
380 386anti-parallel
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