Analysis of interatomic Contacts of Structural Units in PDB entry:
6MRG

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MRG entry

There are 3 chains in PDB entry 6MRG (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 32	PRO 574
B	GLY 33	PRO 574
C	GLY 33	PHE 248

There are114 helices in PDB entry 6MRG. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	66	Right-handed alpha
Helix 2	AA2	A	70	77	Right-handed alpha
Helix 3	AA3	A	78	89	Right-handed alpha
Helix 4	AA4	A	92	112	Right-handed alpha
Helix 5	AA5	A	120	127	Right-handed alpha
Helix 6	AA6	A	156	160	Right-handed 310
Helix 7	AA7	A	168	177	Right-handed alpha
Helix 8	AA8	A	218	226	Right-handed alpha
Helix 9	AA9	A	242	250	Right-handed alpha
Helix 10	AB1	A	257	261	Right-handed 310
Helix 11	AB2	A	286	298	Right-handed alpha
Helix 12	AB3	A	299	306	Right-handed alpha
Helix 13	AB4	A	315	320	Right-handed alpha
Helix 14	AB5	A	339	357	Right-handed alpha
Helix 15	AB6	A	367	374	Right-handed alpha
Helix 16	AB7	A	374	381	Right-handed alpha
Helix 17	AB8	A	385	391	Right-handed alpha
Helix 18	AB9	A	398	402	Right-handed 310
Helix 19	AC1	A	403	410	Right-handed alpha
Helix 20	AC2	A	411	426	Right-handed alpha
Helix 21	AC3	A	426	435	Right-handed alpha
Helix 22	AC4	A	440	465	Right-handed alpha
Helix 23	AC5	A	483	490	Right-handed 310
Helix 24	AC6	A	491	500	Right-handed alpha
Helix 25	AC7	A	513	520	Right-handed alpha
Helix 26	AC8	A	521	523	Right-handed 310
Helix 27	AC9	A	529	540	Right-handed alpha
Helix 28	AD1	A	557	573	Right-handed alpha
Helix 29	AD2	B	34	66	Right-handed alpha
Helix 30	AD3	B	70	76	Right-handed alpha
Helix 31	AD4	B	78	88	Right-handed alpha
Helix 32	AD5	B	92	112	Right-handed alpha
Helix 33	AD6	B	120	127	Right-handed alpha
Helix 34	AD7	B	156	160	Right-handed 310
Helix 35	AD8	B	168	177	Right-handed alpha
Helix 36	AD9	B	188	192	Right-handed 310
Helix 37	AE1	B	218	227	Right-handed alpha
Helix 38	AE2	B	242	249	Right-handed alpha
Helix 39	AE3	B	257	261	Right-handed 310
Helix 40	AE4	B	286	298	Right-handed alpha
Helix 41	AE5	B	299	306	Right-handed alpha
Helix 42	AE6	B	315	321	Right-handed alpha
Helix 43	AE7	B	339	357	Right-handed alpha
Helix 44	AE8	B	367	374	Right-handed alpha
Helix 45	AE9	B	374	381	Right-handed alpha
Helix 46	AF1	B	385	390	Right-handed alpha
Helix 47	AF2	B	391	393	Right-handed 310
Helix 48	AF3	B	398	402	Right-handed 310
Helix 49	AF4	B	403	409	Right-handed alpha
Helix 50	AF5	B	411	423	Right-handed alpha
Helix 51	AF6	B	426	435	Right-handed alpha
Helix 52	AF7	B	440	465	Right-handed alpha
Helix 53	AF8	B	483	490	Right-handed 310
Helix 54	AF9	B	491	500	Right-handed alpha
Helix 55	AG1	B	513	520	Right-handed alpha
Helix 56	AG2	B	521	523	Right-handed 310
Helix 57	AG3	B	529	539	Right-handed alpha
Helix 58	AG4	B	557	572	Right-handed alpha
Helix 59	AG5	C	34	66	Right-handed alpha
Helix 60	AG6	C	70	76	Right-handed alpha
Helix 61	AG7	C	78	88	Right-handed alpha
Helix 62	AG8	C	92	112	Right-handed alpha
Helix 63	AG9	C	120	127	Right-handed alpha
Helix 64	AH1	C	156	160	Right-handed 310
Helix 65	AH2	C	168	177	Right-handed alpha
Helix 66	AH3	C	188	192	Right-handed 310
Helix 67	AH4	C	218	228	Right-handed alpha
Helix 68	AH5	C	242	249	Right-handed alpha
Helix 69	AH6	C	257	261	Right-handed 310
Helix 70	AH7	C	286	298	Right-handed alpha
Helix 71	AH8	C	299	306	Right-handed alpha
Helix 72	AH9	C	315	321	Right-handed alpha
Helix 73	AI1	C	339	356	Right-handed alpha
Helix 74	AI2	C	367	374	Right-handed alpha
Helix 75	AI3	C	374	381	Right-handed alpha
Helix 76	AI4	C	385	391	Right-handed alpha
Helix 77	AI5	C	398	402	Right-handed 310
Helix 78	AI6	C	403	409	Right-handed alpha
Helix 79	AI7	C	411	423	Right-handed alpha
Helix 80	AI8	C	426	435	Right-handed alpha
Helix 81	AI9	C	440	465	Right-handed alpha
Helix 82	AJ1	C	483	490	Right-handed 310
Helix 83	AJ2	C	491	501	Right-handed alpha
Helix 84	AJ3	C	513	520	Right-handed alpha
Helix 85	AJ4	C	521	523	Right-handed 310
Helix 86	AJ5	C	529	540	Right-handed alpha
Helix 87	AJ6	C	557	573	Right-handed alpha
Helix 88	AJ7	D	34	65	Right-handed alpha
Helix 89	AJ8	D	70	76	Right-handed alpha
Helix 90	AJ9	D	78	88	Right-handed alpha
Helix 91	AK1	D	92	112	Right-handed alpha
Helix 92	AK2	D	120	127	Right-handed alpha
Helix 93	AK3	D	168	177	Right-handed alpha
Helix 94	AK4	D	188	192	Right-handed 310
Helix 95	AK5	D	218	227	Right-handed alpha
Helix 96	AK6	D	242	249	Right-handed alpha
Helix 97	AK7	D	257	261	Right-handed 310
Helix 98	AK8	D	286	298	Right-handed alpha
Helix 99	AK9	D	299	306	Right-handed alpha
Helix 100	AL1	D	315	320	Right-handed alpha
Helix 101	AL2	D	339	356	Right-handed alpha
Helix 102	AL3	D	367	374	Right-handed alpha
Helix 103	AL4	D	374	381	Right-handed alpha
Helix 104	AL5	D	385	391	Right-handed alpha
Helix 105	AL6	D	398	402	Right-handed 310
Helix 106	AL7	D	403	410	Right-handed alpha
Helix 107	AL8	D	411	426	Right-handed alpha
Helix 108	AL9	D	426	436	Right-handed alpha
Helix 109	AM1	D	440	465	Right-handed alpha
Helix 110	AM2	D	483	490	Right-handed 310
Helix 111	AM3	D	491	501	Right-handed alpha
Helix 112	AM4	D	513	520	Right-handed alpha
Helix 113	AM5	D	529	539	Right-handed alpha
Helix 114	AM6	D	557	573	Right-handed alpha

There are 8 sheets in PDB entry 6MRG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	114	117	first strand
Strand 2	A	180	185	anti-parallel
Strand 3	A	138	142	parallel
Strand 4	A	232	237	parallel
Strand 5	A	279	284	anti-parallel
Strand 6	A	252	255	anti-parallel
Strand 7	A	504	511	anti-parallel
Strand 8	A	546	553	anti-parallel
Strand 9	A	469	472	anti-parallel
Strand 10	A	326	329	parallel
Strand 11	A	359	362	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	198	first strand
Strand 2	A	202	203	anti-parallel

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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	114	117	first strand
Strand 2	B	180	185	anti-parallel
Strand 3	B	138	142	parallel
Strand 4	B	232	237	parallel
Strand 5	B	279	284	anti-parallel
Strand 6	B	252	255	anti-parallel
Strand 7	B	504	511	anti-parallel
Strand 8	B	546	552	anti-parallel
Strand 9	B	469	473	anti-parallel
Strand 10	B	326	329	parallel
Strand 11	B	359	362	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	197	198	first strand
Strand 2	B	202	203	anti-parallel

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There are 11 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	114	117	first strand
Strand 2	C	180	185	anti-parallel
Strand 3	C	138	142	parallel
Strand 4	C	232	237	parallel
Strand 5	C	279	284	anti-parallel
Strand 6	C	252	255	anti-parallel
Strand 7	C	504	511	anti-parallel
Strand 8	C	546	552	anti-parallel
Strand 9	C	469	473	anti-parallel
Strand 10	C	326	329	parallel
Strand 11	C	359	362	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	197	198	first strand
Strand 2	C	202	203	anti-parallel

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There are 11 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	114	117	first strand
Strand 2	D	180	185	anti-parallel
Strand 3	D	138	142	parallel
Strand 4	D	232	237	parallel
Strand 5	D	279	284	anti-parallel
Strand 6	D	252	255	anti-parallel
Strand 7	D	504	511	anti-parallel
Strand 8	D	546	552	anti-parallel
Strand 9	D	469	473	anti-parallel
Strand 10	D	326	329	parallel
Strand 11	D	359	362	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	197	198	first strand
Strand 2	D	202	203	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MRG

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MRG