Analysis of interatomic Contacts of Structural Units in PDB entry:
6MRM

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MRM entry

There are 3 chains in PDB entry 6MRM (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 48	LEU 338
B	ARG 48	LEU 338
C	THR 19	LEU 338

There are 5 helices in PDB entry 6MRM. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	88	94	Right-handed alpha
Helix 2	AA2	A	174	178	Right-handed 310
Helix 3	AA3	B	89	94	Right-handed alpha
Helix 4	AA4	C	88	94	Right-handed alpha
Helix 5	AA5	C	136	141	Right-handed alpha

There are 20 sheets in PDB entry 6MRM. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	54	60	first strand
Strand 2	A	195	210	anti-parallel
Strand 3	A	96	105	anti-parallel
Strand 4	A	157	158	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	108	110	first strand
Strand 2	A	195	210	anti-parallel
Strand 3	A	96	105	anti-parallel
Strand 4	A	165	166	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	144	149	first strand
Strand 2	A	119	124	anti-parallel
Strand 3	A	184	187	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	220	222	anti-parallel
Strand 3	A	323	325	anti-parallel
Strand 4	A	258	266	anti-parallel
Strand 5	A	293	302	anti-parallel
Strand 6	A	279	281	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	229	230	first strand
Strand 2	A	220	222	anti-parallel
Strand 3	A	323	325	anti-parallel
Strand 4	A	258	266	anti-parallel
Strand 5	A	293	302	anti-parallel
Strand 6	A	287	288	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	242	244	first strand
Strand 2	A	249	251	anti-parallel
Strand 3	A	312	314	anti-parallel
Strand 4	A	273	275	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	62	first strand
Strand 2	B	190	210	anti-parallel
Strand 3	B	96	110	anti-parallel
Strand 4	B	156	158	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	52	62	first strand
Strand 2	B	190	210	anti-parallel
Strand 3	B	96	110	anti-parallel
Strand 4	B	165	166	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	144	148	first strand
Strand 2	B	120	125	anti-parallel
Strand 3	B	182	187	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	230	first strand
Strand 2	B	220	223	anti-parallel
Strand 3	B	322	324	anti-parallel
Strand 4	B	258	266	anti-parallel
Strand 5	B	293	301	anti-parallel
Strand 6	B	280	281	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	229	230	first strand
Strand 2	B	220	223	anti-parallel
Strand 3	B	322	324	anti-parallel
Strand 4	B	258	266	anti-parallel
Strand 5	B	293	301	anti-parallel
Strand 6	B	286	288	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	242	244	first strand
Strand 2	B	249	251	anti-parallel
Strand 3	B	312	315	anti-parallel
Strand 4	B	272	275	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	60	first strand
Strand 2	C	195	202	anti-parallel
Strand 3	C	109	110	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	54	60	first strand
Strand 2	C	195	202	anti-parallel
Strand 3	C	104	106	anti-parallel
Strand 4	C	156	158	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	165	166	first strand
Strand 2	C	96	99	anti-parallel
Strand 3	C	207	210	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	119	125	anti-parallel
Strand 3	C	182	183	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	145	146	first strand
Strand 2	C	119	125	anti-parallel
Strand 3	C	186	188	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	229	231	first strand
Strand 2	C	219	222	anti-parallel
Strand 3	C	323	324	anti-parallel
Strand 4	C	264	266	anti-parallel
Strand 5	C	293	297	anti-parallel
Strand 6	C	286	288	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	242	244	first strand
Strand 2	C	248	251	anti-parallel
Strand 3	C	312	315	anti-parallel
Strand 4	C	272	275	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	279	281	first strand
Strand 2	C	300	302	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MRM

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MRM