Analysis of interatomic Contacts of Structural Units in PDB entry:
6MSO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MSO entry

There are 3 chains in PDB entry 6MSO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 10	LEU 549
B	ALA 10	LEU 549
C	PHE 12	LYS 224

There are 76 helices in PDB entry 6MSO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	53	70	Right-handed alpha
Helix 2	AA2	A	72	85	Right-handed alpha
Helix 3	AA3	A	89	107	Right-handed alpha
Helix 4	AA4	A	135	151	Right-handed alpha
Helix 5	AA5	A	195	200	Right-handed alpha
Helix 6	AA6	A	208	212	Right-handed 310
Helix 7	AA7	A	213	226	Right-handed alpha
Helix 8	AA8	A	246	259	Right-handed alpha
Helix 9	AA9	A	279	292	Right-handed alpha
Helix 10	AB1	A	351	356	Right-handed 310
Helix 11	AB2	A	360	364	Right-handed 310
Helix 12	AB3	A	377	386	Right-handed alpha
Helix 13	AB4	A	404	417	Right-handed alpha
Helix 14	AB5	A	423	428	Right-handed alpha
Helix 15	AB6	A	451	457	Right-handed 310
Helix 16	AB7	A	458	465	Right-handed alpha
Helix 17	AB8	A	478	489	Right-handed alpha
Helix 18	AB9	A	499	507	Right-handed alpha
Helix 19	AC1	A	516	523	Right-handed 310
Helix 20	AC2	A	544	549	Right-handed alpha
Helix 21	AC3	B	52	70	Right-handed alpha
Helix 22	AC4	B	72	85	Right-handed alpha
Helix 23	AC5	B	89	107	Right-handed alpha
Helix 24	AC6	B	135	151	Right-handed alpha
Helix 25	AC7	B	195	200	Right-handed alpha
Helix 26	AC8	B	208	212	Right-handed 310
Helix 27	AC9	B	213	226	Right-handed alpha
Helix 28	AD1	B	227	229	Right-handed 310
Helix 29	AD2	B	246	259	Right-handed alpha
Helix 30	AD3	B	279	292	Right-handed alpha
Helix 31	AD4	B	351	356	Right-handed 310
Helix 32	AD5	B	360	364	Right-handed 310
Helix 33	AD6	B	377	386	Right-handed alpha
Helix 34	AD7	B	404	417	Right-handed alpha
Helix 35	AD8	B	423	428	Right-handed alpha
Helix 36	AD9	B	451	457	Right-handed 310
Helix 37	AE1	B	458	465	Right-handed alpha
Helix 38	AE2	B	478	489	Right-handed alpha
Helix 39	AE3	B	499	507	Right-handed alpha
Helix 40	AE4	B	516	523	Right-handed 310
Helix 41	AE5	B	545	549	Right-handed 310
Helix 42	AE6	C	53	70	Right-handed alpha
Helix 43	AE7	C	72	85	Right-handed alpha
Helix 44	AE8	C	89	107	Right-handed alpha
Helix 45	AE9	C	135	151	Right-handed alpha
Helix 46	AF1	C	195	200	Right-handed alpha
Helix 47	AF2	C	208	212	Right-handed 310
Helix 48	AF3	C	213	225	Right-handed alpha
Helix 49	AF4	C	226	229	Right-handed 310
Helix 50	AF5	C	246	259	Right-handed alpha
Helix 51	AF6	C	279	293	Right-handed alpha
Helix 52	AF7	C	351	356	Right-handed 310
Helix 53	AF8	C	377	387	Right-handed alpha
Helix 54	AF9	C	404	417	Right-handed alpha
Helix 55	AG1	C	422	427	Right-handed 310
Helix 56	AG2	C	451	457	Right-handed 310
Helix 57	AG3	C	458	464	Right-handed alpha
Helix 58	AG4	C	478	489	Right-handed alpha
Helix 59	AG5	C	499	507	Right-handed alpha
Helix 60	AG6	D	53	70	Right-handed alpha
Helix 61	AG7	D	72	85	Right-handed alpha
Helix 62	AG8	D	89	107	Right-handed alpha
Helix 63	AG9	D	135	151	Right-handed alpha
Helix 64	AH1	D	195	200	Right-handed alpha
Helix 65	AH2	D	208	212	Right-handed 310
Helix 66	AH3	D	213	226	Right-handed alpha
Helix 67	AH4	D	246	259	Right-handed alpha
Helix 68	AH5	D	279	292	Right-handed alpha
Helix 69	AH6	D	351	356	Right-handed 310
Helix 70	AH7	D	377	386	Right-handed alpha
Helix 71	AH8	D	404	417	Right-handed alpha
Helix 72	AH9	D	422	427	Right-handed 310
Helix 73	AI1	D	451	457	Right-handed 310
Helix 74	AI2	D	458	465	Right-handed alpha
Helix 75	AI3	D	478	489	Right-handed alpha
Helix 76	AI4	D	499	507	Right-handed alpha

There are 24 sheets in PDB entry 6MSO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	28	32	first strand
Strand 2	A	342	346	anti-parallel
Strand 3	A	333	339	anti-parallel
Strand 4	A	187	194	anti-parallel
Strand 5	A	119	127	anti-parallel
Strand 6	A	176	182	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	36	39	first strand
Strand 2	A	48	51	anti-parallel
Strand 3	A	130	131	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	166	168	first strand
Strand 2	A	157	160	anti-parallel
Strand 3	B	315	316	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	203	207	first strand
Strand 2	A	320	327	anti-parallel
Strand 3	A	236	242	anti-parallel
Strand 4	A	305	312	parallel
Strand 5	A	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	315	316	first strand
Strand 2	B	157	160	anti-parallel
Strand 3	B	166	168	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	373	first strand
Strand 2	A	393	402	parallel
Strand 3	A	430	431	parallel
Strand 4	A	470	473	parallel
Strand 5	A	491	494	parallel
Strand 6	A	524	538	anti-parallel
Strand 7	A	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	370	373	first strand
Strand 2	A	393	402	parallel
Strand 3	A	524	538	anti-parallel
Strand 4	A	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	28	32	first strand
Strand 2	B	342	346	anti-parallel
Strand 3	B	333	339	anti-parallel
Strand 4	B	187	194	anti-parallel
Strand 5	B	119	127	anti-parallel
Strand 6	B	176	182	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	36	39	first strand
Strand 2	B	48	51	anti-parallel
Strand 3	B	130	131	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	207	first strand
Strand 2	B	320	327	anti-parallel
Strand 3	B	236	242	anti-parallel
Strand 4	B	305	312	parallel
Strand 5	B	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	373	first strand
Strand 2	B	393	402	parallel
Strand 3	B	430	431	parallel
Strand 4	B	470	473	parallel
Strand 5	B	491	494	parallel
Strand 6	B	524	538	anti-parallel
Strand 7	B	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	370	373	first strand
Strand 2	B	393	402	parallel
Strand 3	B	524	538	anti-parallel
Strand 4	B	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	32	first strand
Strand 2	C	342	346	anti-parallel
Strand 3	C	333	339	anti-parallel
Strand 4	C	187	194	anti-parallel
Strand 5	C	119	127	anti-parallel
Strand 6	C	176	182	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	36	39	first strand
Strand 2	C	48	51	anti-parallel
Strand 3	C	130	131	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	166	168	first strand
Strand 2	C	157	160	anti-parallel
Strand 3	D	315	316	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	207	first strand
Strand 2	C	320	327	anti-parallel
Strand 3	C	236	244	anti-parallel
Strand 4	C	305	316	parallel
Strand 5	C	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	203	207	first strand
Strand 2	C	320	327	anti-parallel
Strand 3	C	236	244	anti-parallel
Strand 4	C	305	316	parallel
Strand 5	D	157	160	anti-parallel
Strand 6	D	166	168	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	370	373	first strand
Strand 2	C	393	402	parallel
Strand 3	C	430	431	parallel
Strand 4	C	470	473	parallel
Strand 5	C	491	494	parallel
Strand 6	C	524	538	anti-parallel
Strand 7	C	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	370	373	first strand
Strand 2	C	393	402	parallel
Strand 3	C	524	538	anti-parallel
Strand 4	C	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	28	32	first strand
Strand 2	D	342	346	anti-parallel
Strand 3	D	333	339	anti-parallel
Strand 4	D	187	194	anti-parallel
Strand 5	D	119	126	anti-parallel
Strand 6	D	176	181	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	36	39	first strand
Strand 2	D	48	51	anti-parallel
Strand 3	D	130	131	parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	203	207	first strand
Strand 2	D	320	327	anti-parallel
Strand 3	D	236	242	anti-parallel
Strand 4	D	305	312	parallel
Strand 5	D	277	278	anti-parallel

Back to list of sheets
Back to top of page

There are 7 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	370	373	first strand
Strand 2	D	393	402	parallel
Strand 3	D	430	431	parallel
Strand 4	D	470	473	parallel
Strand 5	D	491	494	parallel
Strand 6	D	524	538	anti-parallel
Strand 7	D	508	515	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	370	373	first strand
Strand 2	D	393	402	parallel
Strand 3	D	524	538	anti-parallel
Strand 4	D	508	515	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MSO

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MSO