Analysis of interatomic Contacts of Structural Units in PDB entry:
6MST


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 6MST entry

There are 12 chains in PDB entry 6MST (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
SER 2ALA 55
B
SER 2ALA 55
C
SER 2ALA 55
E
SER 2ALA 55
D
SER 2ALA 55
F
SER 2ALA 55
H
SER 2ALA 55
I
SER 2ALA 55
J
SER 2ALA 55
K
SER 2ALA 55
L
SER 2ALA 55
G
SER 2ALA 55
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 6MST


There are 14 sheets in PDB entry 6MST. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
6 9first strand
Strand 2
C
6 9parallel
Strand 3
E
6 9parallel
Strand 4
G
6 9parallel
Strand 5
I
6 9parallel
Strand 6
K
6 9parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
18 23first strand
Strand 2
C
18 23parallel
Strand 3
E
18 23parallel
Strand 4
G
18 23parallel
Strand 5
I
18 23parallel
Strand 6
K
18 23parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
29 30first strand
Strand 2
C
29 30parallel
Strand 3
E
29 30parallel
Strand 4
G
29 30parallel
Strand 5
I
29 30parallel
Strand 6
K
29 30parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
37 39first strand
Strand 2
C
37 39parallel
Strand 3
E
37 39parallel
Strand 4
G
37 39parallel
Strand 5
I
37 39parallel
Strand 6
K
37 39parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
42 43first strand
Strand 2
C
42 43parallel
Strand 3
E
42 43parallel
Strand 4
G
42 43parallel
Strand 5
I
42 43parallel
Strand 6
K
42 43parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
46 47first strand
Strand 2
C
46 47parallel
Strand 3
E
46 47parallel
Strand 4
G
46 47parallel
Strand 5
I
46 47parallel
Strand 6
K
46 47parallel
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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
52 54first strand
Strand 2
C
52 54parallel
Strand 3
E
52 54parallel
Strand 4
G
52 54parallel
Strand 5
I
52 54parallel
Strand 6
K
52 54parallel
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There are 6 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
6 9first strand
Strand 2
D
6 9parallel
Strand 3
F
6 9parallel
Strand 4
H
6 9parallel
Strand 5
J
6 9parallel
Strand 6
L
6 9parallel
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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
18 23first strand
Strand 2
D
18 23parallel
Strand 3
F
18 23parallel
Strand 4
H
18 23parallel
Strand 5
J
18 23parallel
Strand 6
L
18 23parallel
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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
29 30first strand
Strand 2
D
29 30parallel
Strand 3
F
29 30parallel
Strand 4
H
29 30parallel
Strand 5
J
29 30parallel
Strand 6
L
29 30parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
37 39first strand
Strand 2
D
37 39parallel
Strand 3
F
37 39parallel
Strand 4
H
37 39parallel
Strand 5
J
37 39parallel
Strand 6
L
37 39parallel
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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
42 43first strand
Strand 2
D
42 43parallel
Strand 3
F
42 43parallel
Strand 4
H
42 43parallel
Strand 5
J
42 43parallel
Strand 6
L
42 43parallel
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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
46 47first strand
Strand 2
D
46 47parallel
Strand 3
F
46 47parallel
Strand 4
H
46 47parallel
Strand 5
J
46 47parallel
Strand 6
L
46 47parallel
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There are 6 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
52 54first strand
Strand 2
D
52 54parallel
Strand 3
F
52 54parallel
Strand 4
H
52 54parallel
Strand 5
J
52 54parallel
Strand 6
L
52 54parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il