Analysis of interatomic Contacts of Structural Units in PDB entry:
6MT2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 6MT2 entry

There are 4 chains in PDB entry 6MT2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ARG 29	HIS 208
B	SER 30	LEU 210
C	ALA 33	THR 209
D	ALA 33	LEU 210

There are 21 helices in PDB entry 6MT2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	34	39	Right-handed alpha
Helix 2	AA2	A	147	151	Right-handed 310
Helix 3	AA3	A	153	157	Right-handed 310
Helix 4	AA4	A	158	172	Right-handed alpha
Helix 5	AA5	A	173	177	Right-handed 310
Helix 6	AA6	A	187	206	Right-handed alpha
Helix 7	AA7	B	34	39	Right-handed alpha
Helix 8	AA8	B	147	151	Right-handed 310
Helix 9	AA9	B	153	157	Right-handed 310
Helix 10	AB1	B	158	172	Right-handed alpha
Helix 11	AB2	B	173	177	Right-handed 310
Helix 12	AB3	B	187	208	Right-handed alpha
Helix 13	AB4	C	34	39	Right-handed alpha
Helix 14	AB5	C	79	83	Right-handed 310
Helix 15	AB6	C	153	157	Right-handed 310
Helix 16	AB7	C	158	176	Right-handed alpha
Helix 17	AB8	C	187	209	Right-handed alpha
Helix 18	AB9	D	34	39	Right-handed alpha
Helix 19	AC1	D	153	157	Right-handed 310
Helix 20	AC2	D	158	176	Right-handed alpha
Helix 21	AC3	D	187	208	Right-handed alpha

There are 11 sheets in PDB entry 6MT2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	48	55	first strand
Strand 2	A	87	90	anti-parallel
Strand 3	A	103	107	anti-parallel
Strand 4	A	137	142	parallel
Strand 5	A	117	126	anti-parallel
Strand 6	A	48	55	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	61	65	first strand
Strand 2	A	72	77	anti-parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	133	134	first strand
Strand 2	A	128	130	anti-parallel
Strand 3	A	180	182	anti-parallel

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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	48	55	first strand
Strand 2	B	87	90	anti-parallel
Strand 3	B	103	107	anti-parallel
Strand 4	B	137	142	parallel
Strand 5	B	117	126	anti-parallel
Strand 6	B	48	55	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	61	65	first strand
Strand 2	B	72	77	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	133	134	first strand
Strand 2	B	128	130	anti-parallel
Strand 3	B	180	182	anti-parallel

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There are 6 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	49	55	first strand
Strand 2	C	87	90	anti-parallel
Strand 3	C	103	107	anti-parallel
Strand 4	C	137	142	parallel
Strand 5	C	117	126	anti-parallel
Strand 6	C	49	55	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	61	65	first strand
Strand 2	C	72	77	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	129	130	first strand
Strand 2	C	133	134	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	55	first strand
Strand 2	D	87	90	anti-parallel
Strand 3	D	103	107	anti-parallel
Strand 4	D	137	142	parallel
Strand 5	D	117	126	anti-parallel
Strand 6	D	48	55	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	61	65	first strand
Strand 2	D	72	77	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 6MT2

Analysis of interatomic Contacts of Structural Units in PDB entry:
6MT2